Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AL499605.1-201ENST00000604628 403 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AC008115.3-201ENST00000614874 549 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 AP003400.3-201ENST00000624904 346 ntBASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4AQ8WYN0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 NXF4-202ENST00000416098 1465 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 ATP5HP3-201ENST00000396994 486 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 HMGB1P13-201ENST00000406019 642 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 OR6E1P-201ENST00000414424 923 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 MTND4P3-201ENST00000417829 541 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 HMGB1P49-201ENST00000418882 569 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC124944.2-201ENST00000429866 1242 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AL035458.1-201ENST00000433096 585 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 GSTM5P1-201ENST00000434751 660 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC084290.1-201ENST00000434995 374 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC073052.1-201ENST00000440417 714 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 NOP56P2-201ENST00000447491 769 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC245028.2-201ENST00000458673 253 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC058823.1-201ENST00000485315 474 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC079203.1-201ENST00000487972 404 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC026782.2-201ENST00000510845 636 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC108120.2-201ENST00000512973 294 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC118465.1-201ENST00000513820 1271 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 EIF3KP3-201ENST00000514461 639 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 CYCSP22-201ENST00000517555 339 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 TOMM20P1-201ENST00000534518 427 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC007834.2-201ENST00000536310 343 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 OSBPL9P5-201ENST00000542581 171 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC023050.2-201ENST00000544968 387 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 FAM106CP-201ENST00000582212 507 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 MIR4271-201ENST00000582451 67 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC010503.3-201ENST00000594355 540 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 VN1R78P-201ENST00000597393 564 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC123767.1-202ENST00000620407 817 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 MIR6839-201ENST00000620425 113 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 AC068137.4-201ENST00000638485 296 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 BX649567.1-201ENST00000642071 1134 ntBASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4AQ8WYN0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC112198.2-201ENST00000426589 6996 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC233289.1-201ENST00000403700 508 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 OR4K12P-201ENST00000406538 961 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC092638.1-201ENST00000411966 1275 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 RPS3AP37-201ENST00000419176 745 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC023128.2-201ENST00000420880 1223 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 SRSF1P1-201ENST00000424058 520 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC093084.1-201ENST00000424233 687 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 ETF1P3-201ENST00000430422 1160 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AL138899.2-201ENST00000439139 499 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 PTGES3P1-201ENST00000439531 483 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 HMGN1P2-201ENST00000445197 310 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC112492.1-201ENST00000449607 712 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC108161.1-201ENST00000461060 402 ntBASIC5.53□□□□□ -1.52
ATG4AQ8WYN0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms