Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRAF3IP1Q8TDR0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC068446.1-201ENST00000556425 1549 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 MAPK10-320ENST00000641462 6696 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AL589826.1-201ENST00000340697 249 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 LRRC37BP1-201ENST00000398851 714 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 SNORA11.3-201ENST00000408471 128 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 RPS26P13-201ENST00000419030 330 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 NANOGP4-201ENST00000427230 913 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 RPS29P9-201ENST00000440360 171 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 PTMAP3-201ENST00000447474 330 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AL627224.1-201ENST00000448334 444 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AL356981.1-201ENST00000454879 684 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 HMGB1P4-201ENST00000455362 567 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AP002345.1-201ENST00000456493 928 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AP000942.1-201ENST00000463969 747 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC072052.1-201ENST00000496556 306 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC012339.2-201ENST00000523996 453 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 BNIP3P1-201ENST00000547295 580 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 NMNAT1P1-201ENST00000554095 876 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AL008729.2-201ENST00000606393 473 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC135803.1-201ENST00000608748 565 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC104307.1-201ENST00000616142 196 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 SNORA11.6-201ENST00000619030 128 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC019206.1-201ENST00000621938 425 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AL731566.1-201ENST00000620490 1937 ntBASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAF3IP1Q8TDR0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC000374.1-201ENST00000434698 1745 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 RNU4-39P-201ENST00000362455 127 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 RPA2P2-201ENST00000419698 796 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC006065.1-201ENST00000422539 802 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AL450023.3-201ENST00000440592 271 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 TCEA1P1-201ENST00000449716 880 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 PPIAP20-201ENST00000449839 135 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC092647.2-201ENST00000452998 253 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC016724.1-201ENST00000453215 421 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC097484.1-201ENST00000471148 389 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 COPS8P2-201ENST00000473228 627 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC079841.1-201ENST00000481228 950 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 HIGD1AP14-201ENST00000507617 282 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC021146.7-201ENST00000509604 775 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 BTG4P1-201ENST00000510421 183 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 HMGB1P47-201ENST00000511281 589 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 MTCYBP19-201ENST00000517463 1124 ntBASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAF3IP1Q8TDR0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms