Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-1309P-201ENST00000363305 108 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RNA5SP114-201ENST00000363780 113 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RN7SKP55-201ENST00000364888 307 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-359P-201ENST00000365466 108 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-43P-201ENST00000384302 107 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 MIR138-2-201ENST00000384916 84 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AL590762.1-201ENST00000391782 432 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AL139128.1-201ENST00000413921 941 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 MICG-208ENST00000416822 132 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 NPM1P34-201ENST00000428821 893 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 FABP5P2-201ENST00000439042 408 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AL592114.2-201ENST00000440142 532 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 DEFA11P-201ENST00000446470 261 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 MTND5P22-201ENST00000458380 195 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC026254.2-201ENST00000475295 371 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 HMGB1P28-201ENST00000507778 552 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 SCARNA6-201ENST00000515982 265 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 OR5M6P-201ENST00000530227 937 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC244034.2-201ENST00000562504 509 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC020765.1-201ENST00000604296 328 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC016925.2-201ENST00000605108 242 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC019193.3-201ENST00000609144 554 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RN7SL126P-201ENST00000616400 299 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC026108.1-201ENST00000635444 547 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 OR2AH1P-202ENST00000641232 2744 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 AC091046.3-201ENST00000631455 1574 ntBASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 AP001350.1-201ENST00000601906 1524 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 CKAP2P1-201ENST00000555477 2049 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 Z83820.1-201ENST00000456978 1499 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 FAM32BP-201ENST00000344033 333 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 RNU12-2P-201ENST00000364789 156 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 MIR640-201ENST00000385086 96 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 RPL5P18-201ENST00000406671 891 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-373P-201ENST00000411247 98 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 HSPE1P16-201ENST00000426640 348 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 PHB2P1-201ENST00000434943 890 ntBASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.06□□□□□ -1.28
LYSMD3Q7Z3D4 AL604028.2-201ENST00000437848 788 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms