Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AL512310.9-201ENST00000553311 948 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 NDUFB4P11-201ENST00000560510 395 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC116553.2-201ENST00000564203 463 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 LINC00216-201ENST00000623548 1126 ntBASIC4.58□□□□□ -1.68
NIPAL3Q6P499 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.58□□□□□ -1.68
NIPAL3Q6P499 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 TCP1P3-201ENST00000414406 1498 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 RARSP1-201ENST00000542842 1418 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AP001642.1-201ENST00000624727 2117 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 RPL23P2-201ENST00000320371 421 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 UBBP2-201ENST00000376781 231 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 SNORA2.3-201ENST00000383920 135 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 MIR1271-201ENST00000408537 86 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 RNU2-50P-201ENST00000410494 143 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 RPL36AP10-201ENST00000421785 322 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC004980.3-201ENST00000447046 365 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 GYG1P1-201ENST00000460864 698 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 RN7SL222P-201ENST00000476452 299 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 CDH12P2-201ENST00000504393 298 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 ENPP7P9-201ENST00000514456 627 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 SCARNA21.2-201ENST00000516600 166 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC125612.1-201ENST00000547580 377 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 OR11J2P-201ENST00000555298 907 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AP000894.4-201ENST00000610185 483 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 BNIP3P41-202ENST00000616656 861 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC015871.5-202ENST00000623252 701 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC099494.2-201ENST00000623371 978 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AL139254.3-201ENST00000641097 674 ntBASIC4.57□□□□□ -1.68
NIPAL3Q6P499 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NIPAL3Q6P499 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NIPAL3Q6P499 AC104260.2-201ENST00000623551 3497 ntBASIC4.56□□□□□ -1.68
NIPAL3Q6P499 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.56□□□□□ -1.68
NIPAL3Q6P499 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NIPAL3Q6P499 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.56□□□□□ -1.68
NIPAL3Q6P499 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NIPAL3Q6P499 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms