Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX4Q06945 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX4Q06945 VPS25P1-201ENST00000455691 508 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 RPL5P24-201ENST00000463742 885 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX4Q06945 AC109462.1-201ENST00000491087 368 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 AC108941.1-201ENST00000502853 530 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX4Q06945 MTND5P5-201ENST00000503764 376 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.7□□□□□ -1.34
SOX4Q06945 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX4Q06945 AC022483.1-201ENST00000514020 567 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 SCARNA15.1-201ENST00000516384 125 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX4Q06945 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.7□□□□□ -1.34
SOX4Q06945 GTF2IP22-201ENST00000554443 182 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
SOX4Q06945 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX4Q06945 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.7□□□□□ -1.34
SOX4Q06945 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.7□□□□□ -1.34
SOX4Q06945 AC092332.1-201ENST00000563684 829 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 UBE2FP2-201ENST00000566646 462 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 MIR4310-201ENST00000582950 57 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX4Q06945 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.7□□□□□ -1.34
SOX4Q06945 AC012065.4-201ENST00000602445 679 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.7□□□□□ -1.34
SOX4Q06945 BNIP3P9-201ENST00000603714 553 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 MIR6861-201ENST00000618657 64 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SOX4Q06945 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SOX4Q06945 AL391261.1-201ENST00000555712 1479 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 AL731556.1-201ENST00000394628 3711 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX4Q06945 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX4Q06945 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.7□□□□□ -1.34
SOX4Q06945 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX4Q06945 PARP4P1-201ENST00000435945 2337 ntBASIC6.7□□□□□ -1.34
SOX4Q06945 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.7□□□□□ -1.34
SOX4Q06945 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SOX4Q06945 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SOX4Q06945 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX4Q06945 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 AC110373.1-201ENST00000505994 3505 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
SOX4Q06945 RNU2-65P-201ENST00000410162 185 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 RN7SKP56-201ENST00000410513 331 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 PIGPP2-201ENST00000411569 458 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 UBE2V1P14-201ENST00000415815 558 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 CYP4F30P-202ENST00000420048 405 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 AL512286.1-201ENST00000439244 400 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX4Q06945 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 HMGB1P16-201ENST00000447155 540 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 AC002553.3-201ENST00000453002 341 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 PPIAP27-201ENST00000453800 265 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX4Q06945 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 RNA5SP340-201ENST00000517132 107 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.69□□□□□ -1.34
SOX4Q06945 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX4Q06945 AP004609.2-201ENST00000532177 190 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 AC079905.1-201ENST00000549280 475 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 DPPA3P2-201ENST00000553589 478 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.69□□□□□ -1.34
SOX4Q06945 AL138976.2-201ENST00000563989 694 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX4Q06945 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.69□□□□□ -1.34
SOX4Q06945 AC008507.3-201ENST00000585753 472 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 FAM157B-203ENST00000639350 358 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 AC016251.2-201ENST00000623393 3089 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 AC117409.1-201ENST00000470499 1310 ntBASIC6.69□□□□□ -1.34
SOX4Q06945 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX4Q06945 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX4Q06945 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms