Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 MIR133A2-201ENST00000347538 102 ntBASIC5.17□□□□□ -1.58
RAE1P78406 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 RNU6-549P-201ENST00000384433 107 ntBASIC5.17□□□□□ -1.58
RAE1P78406 RNA5SP284-201ENST00000384547 118 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.17□□□□□ -1.58
RAE1P78406 AC079809.1-201ENST00000415468 276 ntBASIC5.17□□□□□ -1.58
RAE1P78406 GTF2IP2-201ENST00000424290 697 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 AKR1B10P1-201ENST00000425765 942 ntBASIC5.17□□□□□ -1.58
RAE1P78406 MTND6P12-201ENST00000428247 522 ntBASIC5.17□□□□□ -1.58
RAE1P78406 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.17□□□□□ -1.58
RAE1P78406 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 MTCYBP42-201ENST00000444653 1130 ntBASIC5.17□□□□□ -1.58
RAE1P78406 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.17□□□□□ -1.58
RAE1P78406 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.17□□□□□ -1.58
RAE1P78406 AC109481.1-201ENST00000509173 282 ntBASIC5.17□□□□□ -1.58
RAE1P78406 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.17□□□□□ -1.58
RAE1P78406 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.17□□□□□ -1.58
RAE1P78406 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.17□□□□□ -1.58
RAE1P78406 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.17□□□□□ -1.58
RAE1P78406 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 AL049872.1-201ENST00000556323 322 ntBASIC5.17□□□□□ -1.58
RAE1P78406 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 AC027104.1-201ENST00000563702 681 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC009094.1-201ENST00000564443 426 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC095057.3-201ENST00000567102 1157 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AGGF1P6-201ENST00000569213 976 ntBASIC5.17□□□□□ -1.58
RAE1P78406 MTND4LP24-201ENST00000572277 291 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.17□□□□□ -1.58
RAE1P78406 AL020997.3-201ENST00000602843 359 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 AC007349.4-201ENST00000608114 532 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC092106.3-201ENST00000611308 722 ntBASIC5.17□□□□□ -1.58
RAE1P78406 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 AC091304.6-201ENST00000619761 202 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC015660.5-201ENST00000623238 564 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC026422.1-201ENST00000623961 452 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC018628.1-201ENST00000624147 3819 ntBASIC5.17□□□□□ -1.58
RAE1P78406 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 AL078621.3-201ENST00000623707 2042 ntBASIC5.17□□□□□ -1.58
RAE1P78406 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.17□□□□□ -1.58
RAE1P78406 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RAE1P78406 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAE1P78406 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RAE1P78406 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 RNU1-87P-201ENST00000363727 170 ntBASIC5.16□□□□□ -1.58
RAE1P78406 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAE1P78406 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.16□□□□□ -1.58
RAE1P78406 SNORA5.1-201ENST00000384275 131 ntBASIC5.16□□□□□ -1.58
RAE1P78406 RNA5SP122-201ENST00000384457 108 ntBASIC5.16□□□□□ -1.58
RAE1P78406 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RAE1P78406 RNU6-1320P-201ENST00000390838 107 ntBASIC5.16□□□□□ -1.58
RAE1P78406 RNU6-1269P-201ENST00000391139 107 ntBASIC5.16□□□□□ -1.58
RAE1P78406 RNA5SP241-201ENST00000391326 114 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RAE1P78406 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.16□□□□□ -1.58
RAE1P78406 RN7SKP278-201ENST00000410504 342 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AC105402.1-201ENST00000413336 545 ntBASIC5.16□□□□□ -1.58
RAE1P78406 TCEA1P4-201ENST00000415066 844 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AL356320.2-201ENST00000417263 507 ntBASIC5.16□□□□□ -1.58
RAE1P78406 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.16□□□□□ -1.58
RAE1P78406 OR6K4P-201ENST00000423179 955 ntBASIC5.16□□□□□ -1.58
RAE1P78406 OR5M12P-201ENST00000423388 929 ntBASIC5.16□□□□□ -1.58
RAE1P78406 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms