Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC092162.1-201ENST00000432828 434 ntBASIC4.64□□□□□ -1.67
VSX2P58304 RBMY2TP-201ENST00000451162 947 ntBASIC4.64□□□□□ -1.67
VSX2P58304 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.64□□□□□ -1.67
VSX2P58304 AURKAPS2-201ENST00000454983 333 ntBASIC4.64□□□□□ -1.67
VSX2P58304 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.64□□□□□ -1.67
VSX2P58304 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.64□□□□□ -1.67
VSX2P58304 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.64□□□□□ -1.67
VSX2P58304 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.64□□□□□ -1.67
VSX2P58304 AC026688.1-201ENST00000520639 1168 ntBASIC4.64□□□□□ -1.67
VSX2P58304 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.64□□□□□ -1.67
VSX2P58304 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.64□□□□□ -1.67
VSX2P58304 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.64□□□□□ -1.67
VSX2P58304 SNORA74C-1-201ENST00000580726 201 ntBASIC4.64□□□□□ -1.67
VSX2P58304 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.64□□□□□ -1.67
VSX2P58304 AC011453.2-201ENST00000603737 729 ntBASIC4.64□□□□□ -1.67
VSX2P58304 AC087468.1-201ENST00000604365 630 ntBASIC4.64□□□□□ -1.67
VSX2P58304 AC007497.1-201ENST00000610421 561 ntBASIC4.64□□□□□ -1.67
VSX2P58304 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.64□□□□□ -1.67
VSX2P58304 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 SDAD1P1-202ENST00000524156 2051 ntBASIC4.64□□□□□ -1.67
VSX2P58304 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.64□□□□□ -1.67
VSX2P58304 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.64□□□□□ -1.67
VSX2P58304 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.64□□□□□ -1.67
VSX2P58304 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VSX2P58304 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.64□□□□□ -1.67
VSX2P58304 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
VSX2P58304 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.63□□□□□ -1.67
VSX2P58304 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VSX2P58304 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.63□□□□□ -1.67
VSX2P58304 AC083843.3-201ENST00000623679 2186 ntBASIC4.63□□□□□ -1.67
VSX2P58304 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VSX2P58304 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VSX2P58304 AL589994.1-201ENST00000404962 340 ntBASIC4.63□□□□□ -1.67
VSX2P58304 RNA5SP113-201ENST00000410486 84 ntBASIC4.63□□□□□ -1.67
VSX2P58304 SNORA79B-201ENST00000410557 148 ntBASIC4.63□□□□□ -1.67
VSX2P58304 RNA5SP345-201ENST00000410646 108 ntBASIC4.63□□□□□ -1.67
VSX2P58304 OR13Z1P-201ENST00000416141 834 ntBASIC4.63□□□□□ -1.67
VSX2P58304 AC234781.4-201ENST00000419384 244 ntBASIC4.63□□□□□ -1.67
VSX2P58304 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.63□□□□□ -1.67
VSX2P58304 AC004074.1-201ENST00000421810 1063 ntBASIC4.63□□□□□ -1.67
VSX2P58304 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.63□□□□□ -1.67
VSX2P58304 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.63□□□□□ -1.67
VSX2P58304 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.63□□□□□ -1.67
VSX2P58304 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.63□□□□□ -1.67
VSX2P58304 AL356981.1-201ENST00000454879 684 ntBASIC4.63□□□□□ -1.67
VSX2P58304 AC073073.1-201ENST00000493920 463 ntBASIC4.63□□□□□ -1.67
VSX2P58304 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.63□□□□□ -1.67
VSX2P58304 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.63□□□□□ -1.67
VSX2P58304 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.63□□□□□ -1.67
VSX2P58304 AP001880.2-201ENST00000538233 448 ntBASIC4.63□□□□□ -1.67
VSX2P58304 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.63□□□□□ -1.67
VSX2P58304 MTND2P17-201ENST00000550281 688 ntBASIC4.63□□□□□ -1.67
VSX2P58304 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.63□□□□□ -1.67
VSX2P58304 UBE2FP2-201ENST00000566646 462 ntBASIC4.63□□□□□ -1.67
VSX2P58304 AC233702.9-201ENST00000581528 203 ntBASIC4.63□□□□□ -1.67
VSX2P58304 MIR4737-201ENST00000583979 81 ntBASIC4.63□□□□□ -1.67
VSX2P58304 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.63□□□□□ -1.67
VSX2P58304 FAM27B-201ENST00000610601 213 ntBASIC4.63□□□□□ -1.67
VSX2P58304 CR381572.2-201ENST00000624852 397 ntBASIC4.63□□□□□ -1.67
VSX2P58304 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.63□□□□□ -1.67
VSX2P58304 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.63□□□□□ -1.67
VSX2P58304 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 AL929601.4-201ENST00000613011 1341 ntBASIC4.63□□□□□ -1.67
VSX2P58304 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 AC009643.2-201ENST00000603543 1448 ntBASIC4.63□□□□□ -1.67
VSX2P58304 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VSX2P58304 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.62□□□□□ -1.67
VSX2P58304 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VSX2P58304 NCLP2-201ENST00000416078 1462 ntBASIC4.62□□□□□ -1.67
VSX2P58304 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VSX2P58304 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VSX2P58304 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VSX2P58304 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VSX2P58304 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VSX2P58304 RNA5SP87-201ENST00000384155 118 ntBASIC4.62□□□□□ -1.67
VSX2P58304 AC114755.2-201ENST00000413520 361 ntBASIC4.62□□□□□ -1.67
VSX2P58304 AC007738.1-201ENST00000413892 348 ntBASIC4.62□□□□□ -1.67
VSX2P58304 RPL35AP21-201ENST00000437667 333 ntBASIC4.62□□□□□ -1.67
VSX2P58304 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.62□□□□□ -1.67
VSX2P58304 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.62□□□□□ -1.67
VSX2P58304 MTND6P5-201ENST00000448266 512 ntBASIC4.62□□□□□ -1.67
VSX2P58304 RN7SL517P-201ENST00000462240 305 ntBASIC4.62□□□□□ -1.67
VSX2P58304 AP000942.1-201ENST00000463969 747 ntBASIC4.62□□□□□ -1.67
VSX2P58304 Y_RNA.719-201ENST00000517156 106 ntBASIC4.62□□□□□ -1.67
VSX2P58304 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.62□□□□□ -1.67
VSX2P58304 BNIP3P1-201ENST00000547295 580 ntBASIC4.62□□□□□ -1.67
VSX2P58304 AC133555.2-201ENST00000550213 292 ntBASIC4.62□□□□□ -1.67
VSX2P58304 AL358913.1-201ENST00000554342 121 ntBASIC4.62□□□□□ -1.67
VSX2P58304 AC084759.1-201ENST00000561168 290 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms