Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NPM1P22-201ENST00000427761 952 ntBASIC4.76□□□□□ -1.65
CDH11P55287 GSTM5P1-201ENST00000434751 660 ntBASIC4.76□□□□□ -1.65
CDH11P55287 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH11P55287 GTF3AP5-201ENST00000442645 697 ntBASIC4.76□□□□□ -1.65
CDH11P55287 RNFT1P2-201ENST00000443064 757 ntBASIC4.76□□□□□ -1.65
CDH11P55287 MOB1AP2-201ENST00000446060 614 ntBASIC4.76□□□□□ -1.65
CDH11P55287 NOP56P2-201ENST00000447491 769 ntBASIC4.76□□□□□ -1.65
CDH11P55287 DNAJB5P1-201ENST00000454004 806 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AL035090.1-201ENST00000454835 332 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AC079168.1-201ENST00000458741 345 ntBASIC4.76□□□□□ -1.65
CDH11P55287 RPEP1-201ENST00000504507 658 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AC119751.4-201ENST00000507498 357 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH11P55287 AC010374.2-201ENST00000512933 535 ntBASIC4.76□□□□□ -1.65
CDH11P55287 RFPL4AP5-201ENST00000514977 504 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH11P55287 SOX5P1-201ENST00000524155 1127 ntBASIC4.76□□□□□ -1.65
CDH11P55287 C1DP5-201ENST00000525775 383 ntBASIC4.76□□□□□ -1.65
CDH11P55287 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH11P55287 AC044860.2-201ENST00000561005 179 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AC005341.1-201ENST00000571086 708 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH11P55287 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH11P55287 AC006116.7-201ENST00000590141 756 ntBASIC4.76□□□□□ -1.65
CDH11P55287 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH11P55287 AL021707.7-201ENST00000607991 416 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AC000068.2-201ENST00000608816 460 ntBASIC4.76□□□□□ -1.65
CDH11P55287 MIR8084-201ENST00000614105 89 ntBASIC4.76□□□□□ -1.65
CDH11P55287 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH11P55287 AL138955.1-201ENST00000622881 1040 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AC018445.2-201ENST00000622987 260 ntBASIC4.76□□□□□ -1.65
CDH11P55287 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH11P55287 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH11P55287 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH11P55287 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH11P55287 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH11P55287 MTND4P9-201ENST00000507819 1346 ntBASIC4.75□□□□□ -1.65
CDH11P55287 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH11P55287 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH11P55287 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CDH11P55287 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH11P55287 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH11P55287 AC005294.1-201ENST00000355509 281 ntBASIC4.75□□□□□ -1.65
CDH11P55287 MIR223-201ENST00000385204 110 ntBASIC4.75□□□□□ -1.65
CDH11P55287 RNA5SP105-201ENST00000391123 113 ntBASIC4.75□□□□□ -1.65
CDH11P55287 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 NPM1P40-201ENST00000412758 733 ntBASIC4.75□□□□□ -1.65
CDH11P55287 SLC35E1P1-201ENST00000419313 864 ntBASIC4.75□□□□□ -1.65
CDH11P55287 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 BX119904.1-201ENST00000432026 348 ntBASIC4.75□□□□□ -1.65
CDH11P55287 MTCYBP29-201ENST00000436327 1006 ntBASIC4.75□□□□□ -1.65
CDH11P55287 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 AC105399.1-202ENST00000447303 205 ntBASIC4.75□□□□□ -1.65
CDH11P55287 BX842559.2-201ENST00000451418 605 ntBASIC4.75□□□□□ -1.65
CDH11P55287 AURKAPS1-201ENST00000451805 1212 ntBASIC4.75□□□□□ -1.65
CDH11P55287 RN7SL172P-201ENST00000460535 303 ntBASIC4.75□□□□□ -1.65
CDH11P55287 RN7SL515P-201ENST00000463999 297 ntBASIC4.75□□□□□ -1.65
CDH11P55287 AC024558.1-201ENST00000505008 528 ntBASIC4.75□□□□□ -1.65
CDH11P55287 OR5M14P-201ENST00000506803 618 ntBASIC4.75□□□□□ -1.65
CDH11P55287 HMGB1P44-201ENST00000508597 572 ntBASIC4.75□□□□□ -1.65
CDH11P55287 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH11P55287 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 MTND1P6-201ENST00000523621 946 ntBASIC4.75□□□□□ -1.65
CDH11P55287 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 AP004607.2-201ENST00000533949 322 ntBASIC4.75□□□□□ -1.65
CDH11P55287 AC068339.2-201ENST00000534395 618 ntBASIC4.75□□□□□ -1.65
CDH11P55287 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.75□□□□□ -1.65
CDH11P55287 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.75□□□□□ -1.65
CDH11P55287 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.75□□□□□ -1.65
CDH11P55287 RN7SL708P-201ENST00000580952 299 ntBASIC4.75□□□□□ -1.65
CDH11P55287 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH11P55287 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH11P55287 AC009597.2-201ENST00000604659 592 ntBASIC4.75□□□□□ -1.65
CDH11P55287 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH11P55287 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH11P55287 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH11P55287 AC073869.10-201ENST00000642016 354 ntBASIC4.75□□□□□ -1.65
CDH11P55287 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH11P55287 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.75□□□□□ -1.65
CDH11P55287 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CDH11P55287 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH11P55287 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms