Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH4P55283 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH4P55283 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH4P55283 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH4P55283 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH4P55283 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH4P55283 AL512782.1-201ENST00000603093 364 ntBASIC4.98□□□□□ -1.61
CDH4P55283 AL391358.1-201ENST00000605342 190 ntBASIC4.98□□□□□ -1.61
CDH4P55283 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 AC008833.1-201ENST00000611633 691 ntBASIC4.98□□□□□ -1.61
CDH4P55283 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 MTCO1P22-201ENST00000604619 1360 ntBASIC4.98□□□□□ -1.61
CDH4P55283 NCLP2-201ENST00000416078 1462 ntBASIC4.98□□□□□ -1.61
CDH4P55283 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH4P55283 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 AC093591.2-201ENST00000565254 3843 ntBASIC4.98□□□□□ -1.61
CDH4P55283 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CDH4P55283 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH4P55283 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH4P55283 AC073429.2-201ENST00000569694 1444 ntBASIC4.97□□□□□ -1.61
CDH4P55283 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH4P55283 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CDH4P55283 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDH4P55283 RNA5SP191-201ENST00000362585 102 ntBASIC4.97□□□□□ -1.61
CDH4P55283 Y_RNA.62-201ENST00000362840 99 ntBASIC4.97□□□□□ -1.61
CDH4P55283 BMS1P3-201ENST00000372011 932 ntBASIC4.97□□□□□ -1.61
CDH4P55283 U3.30-201ENST00000391308 210 ntBASIC4.97□□□□□ -1.61
CDH4P55283 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH4P55283 AL049745.1-201ENST00000433953 286 ntBASIC4.97□□□□□ -1.61
CDH4P55283 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH4P55283 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH4P55283 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH4P55283 AC010733.1-201ENST00000451515 401 ntBASIC4.97□□□□□ -1.61
CDH4P55283 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH4P55283 GYG1P1-201ENST00000460864 698 ntBASIC4.97□□□□□ -1.61
CDH4P55283 AP000942.1-201ENST00000463969 747 ntBASIC4.97□□□□□ -1.61
CDH4P55283 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 RNU6-709P-201ENST00000517257 104 ntBASIC4.97□□□□□ -1.61
CDH4P55283 NPM1P52-201ENST00000518264 846 ntBASIC4.97□□□□□ -1.61
CDH4P55283 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH4P55283 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH4P55283 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH4P55283 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH4P55283 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH4P55283 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH4P55283 AL049830.4-201ENST00000555149 351 ntBASIC4.97□□□□□ -1.61
CDH4P55283 AC018552.1-201ENST00000562099 811 ntBASIC4.97□□□□□ -1.61
CDH4P55283 UBE2FP2-201ENST00000566646 462 ntBASIC4.97□□□□□ -1.61
CDH4P55283 AC091042.1-201ENST00000579213 173 ntBASIC4.97□□□□□ -1.61
CDH4P55283 SNORD39.2-201ENST00000579995 76 ntBASIC4.97□□□□□ -1.61
CDH4P55283 AC022726.1-201ENST00000587475 207 ntBASIC4.97□□□□□ -1.61
CDH4P55283 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDH4P55283 AC116651.1-201ENST00000609724 556 ntBASIC4.97□□□□□ -1.61
CDH4P55283 FAM27B-201ENST00000610601 213 ntBASIC4.97□□□□□ -1.61
CDH4P55283 AC100827.5-201ENST00000615883 426 ntBASIC4.97□□□□□ -1.61
CDH4P55283 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 AC006840.1-201ENST00000623069 542 ntBASIC4.97□□□□□ -1.61
CDH4P55283 AC073869.10-201ENST00000642016 354 ntBASIC4.97□□□□□ -1.61
CDH4P55283 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH4P55283 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH4P55283 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH4P55283 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.61
CDH4P55283 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH4P55283 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH4P55283 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH4P55283 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CDH4P55283 AC103591.2-201ENST00000265259 766 ntBASIC4.96□□□□□ -1.62
CDH4P55283 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.96□□□□□ -1.62
CDH4P55283 VDAC2P1-201ENST00000399358 958 ntBASIC4.96□□□□□ -1.62
CDH4P55283 RPL10P10-201ENST00000403509 664 ntBASIC4.96□□□□□ -1.62
CDH4P55283 RN7SKP100-201ENST00000411258 284 ntBASIC4.96□□□□□ -1.62
CDH4P55283 LINC00993-201ENST00000420453 540 ntBASIC4.96□□□□□ -1.62
CDH4P55283 USP9YP9-201ENST00000429406 715 ntBASIC4.96□□□□□ -1.62
CDH4P55283 NRBF2P3-201ENST00000432731 865 ntBASIC4.96□□□□□ -1.62
CDH4P55283 RPS17P8-201ENST00000434525 335 ntBASIC4.96□□□□□ -1.62
CDH4P55283 AL451139.1-201ENST00000434718 346 ntBASIC4.96□□□□□ -1.62
CDH4P55283 AL138787.1-202ENST00000437804 898 ntBASIC4.96□□□□□ -1.62
CDH4P55283 TCEA1P3-201ENST00000443005 880 ntBASIC4.96□□□□□ -1.62
CDH4P55283 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH4P55283 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH4P55283 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH4P55283 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.96□□□□□ -1.62
CDH4P55283 ENPP7P9-201ENST00000514456 627 ntBASIC4.96□□□□□ -1.62
CDH4P55283 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH4P55283 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH4P55283 AC018442.3-201ENST00000523025 183 ntBASIC4.96□□□□□ -1.62
CDH4P55283 OR8A2P-201ENST00000528631 952 ntBASIC4.96□□□□□ -1.62
CDH4P55283 AC005868.1-201ENST00000536421 331 ntBASIC4.96□□□□□ -1.62
CDH4P55283 AP001880.2-201ENST00000538233 448 ntBASIC4.96□□□□□ -1.62
CDH4P55283 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH4P55283 RN7SL802P-201ENST00000577858 299 ntBASIC4.96□□□□□ -1.62
CDH4P55283 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms