Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 COX6B1P3-201ENST00000312310 260 ntBASIC6.94□□□□□ -1.3
USP11P51784 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 RNU6-500P-201ENST00000362349 107 ntBASIC6.94□□□□□ -1.3
USP11P51784 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 XGY1-201ENST00000381172 446 ntBASIC6.94□□□□□ -1.3
USP11P51784 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
USP11P51784 RNU2-41P-201ENST00000410991 178 ntBASIC6.94□□□□□ -1.3
USP11P51784 NUP35P2-201ENST00000416748 943 ntBASIC6.94□□□□□ -1.3
USP11P51784 RPS7P8-201ENST00000418311 581 ntBASIC6.94□□□□□ -1.3
USP11P51784 RPS17P17-201ENST00000419392 409 ntBASIC6.94□□□□□ -1.3
USP11P51784 AL139421.1-201ENST00000423010 169 ntBASIC6.94□□□□□ -1.3
USP11P51784 RPL12P12-201ENST00000424633 501 ntBASIC6.94□□□□□ -1.3
USP11P51784 AC009784.1-201ENST00000426484 460 ntBASIC6.94□□□□□ -1.3
USP11P51784 ISCA1P1-201ENST00000426679 387 ntBASIC6.94□□□□□ -1.3
USP11P51784 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.94□□□□□ -1.3
USP11P51784 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 RAB9AP5-201ENST00000437794 597 ntBASIC6.94□□□□□ -1.3
USP11P51784 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 RAB9AP2-201ENST00000443911 597 ntBASIC6.94□□□□□ -1.3
USP11P51784 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 HMGN1P10-201ENST00000474557 553 ntBASIC6.94□□□□□ -1.3
USP11P51784 AC037198.2-201ENST00000478845 733 ntBASIC6.94□□□□□ -1.3
USP11P51784 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.94□□□□□ -1.3
USP11P51784 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.94□□□□□ -1.3
USP11P51784 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.94□□□□□ -1.3
USP11P51784 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.94□□□□□ -1.3
USP11P51784 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 AC005726.4-201ENST00000582858 458 ntBASIC6.94□□□□□ -1.3
USP11P51784 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.94□□□□□ -1.3
USP11P51784 AC008507.1-201ENST00000587506 734 ntBASIC6.94□□□□□ -1.3
USP11P51784 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
USP11P51784 IMMP1LP1-201ENST00000605170 488 ntBASIC6.94□□□□□ -1.3
USP11P51784 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.94□□□□□ -1.3
USP11P51784 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.94□□□□□ -1.3
USP11P51784 AC090970.3-201ENST00000612566 866 ntBASIC6.94□□□□□ -1.3
USP11P51784 AC099654.5-201ENST00000636479 350 ntBASIC6.94□□□□□ -1.3
USP11P51784 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 AC011477.1-204ENST00000623416 1325 ntBASIC6.94□□□□□ -1.3
USP11P51784 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USP11P51784 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.94□□□□□ -1.3
USP11P51784 AC079298.1-201ENST00000625026 1619 ntBASIC6.94□□□□□ -1.3
USP11P51784 TTC41P-205ENST00000551270 3963 ntBASIC6.93□□□□□ -1.3
USP11P51784 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 TTC39DP-201ENST00000416781 1688 ntBASIC6.93□□□□□ -1.3
USP11P51784 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 AC139426.3-201ENST00000605648 2059 ntBASIC6.93□□□□□ -1.3
USP11P51784 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 SNORA72.1-201ENST00000363485 129 ntBASIC6.93□□□□□ -1.3
USP11P51784 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 Y_RNA.554-201ENST00000384672 102 ntBASIC6.93□□□□□ -1.3
USP11P51784 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
USP11P51784 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.93□□□□□ -1.3
USP11P51784 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.93□□□□□ -1.3
USP11P51784 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.93□□□□□ -1.3
USP11P51784 AC245054.1-201ENST00000420944 258 ntBASIC6.93□□□□□ -1.3
USP11P51784 AC004448.2-201ENST00000422360 586 ntBASIC6.93□□□□□ -1.3
USP11P51784 AL022400.1-201ENST00000423946 935 ntBASIC6.93□□□□□ -1.3
USP11P51784 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.93□□□□□ -1.3
USP11P51784 MED14P1-201ENST00000430517 648 ntBASIC6.93□□□□□ -1.3
USP11P51784 AC069154.1-201ENST00000432914 542 ntBASIC6.93□□□□□ -1.3
USP11P51784 AC093155.1-201ENST00000440164 826 ntBASIC6.93□□□□□ -1.3
USP11P51784 MTND4LP16-201ENST00000440828 295 ntBASIC6.93□□□□□ -1.3
USP11P51784 MTND1P30-201ENST00000441241 901 ntBASIC6.93□□□□□ -1.3
USP11P51784 RAB11AP1-201ENST00000442978 646 ntBASIC6.93□□□□□ -1.3
USP11P51784 FTLP8-201ENST00000446770 267 ntBASIC6.93□□□□□ -1.3
USP11P51784 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 AC112187.1-201ENST00000455837 479 ntBASIC6.93□□□□□ -1.3
USP11P51784 SNRPGP9-201ENST00000456025 225 ntBASIC6.93□□□□□ -1.3
USP11P51784 Z83838.1-202ENST00000456225 839 ntBASIC6.93□□□□□ -1.3
USP11P51784 UBDP1-202ENST00000457888 382 ntBASIC6.93□□□□□ -1.3
USP11P51784 AC091959.2-201ENST00000477363 321 ntBASIC6.93□□□□□ -1.3
USP11P51784 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 LSM3P4-201ENST00000502948 309 ntBASIC6.93□□□□□ -1.3
USP11P51784 RNU6-507P-201ENST00000516045 100 ntBASIC6.93□□□□□ -1.3
USP11P51784 RNU6-678P-201ENST00000516832 109 ntBASIC6.93□□□□□ -1.3
USP11P51784 AP003080.1-202ENST00000526526 915 ntBASIC6.93□□□□□ -1.3
USP11P51784 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.93□□□□□ -1.3
USP11P51784 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.93□□□□□ -1.3
USP11P51784 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.93□□□□□ -1.3
USP11P51784 AC074029.1-201ENST00000552531 1044 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms