Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SMARCA4P51532 AC068733.2-201ENST00000605434 1418 ntBASIC8.15□□□□□ -1.1
SMARCA4P51532 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SMARCA4P51532 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SMARCA4P51532 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SMARCA4P51532 AL591135.1-201ENST00000401578 5914 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 AL391684.1-202ENST00000641293 1636 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 RPL21P65-201ENST00000406094 466 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 NPM1P26-201ENST00000426339 738 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 AL132838.2-201ENST00000492041 314 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.14□□□□□ -1.11
SMARCA4P51532 AC067931.1-201ENST00000624190 671 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
SMARCA4P51532 ZNF812P-201ENST00000457674 1694 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SMARCA4P51532 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SMARCA4P51532 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SMARCA4P51532 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC8.14□□□□□ -1.11
SMARCA4P51532 RPL7P33-201ENST00000444159 742 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.14□□□□□ -1.11
SMARCA4P51532 RPS7P7-201ENST00000463499 571 ntBASIC8.14□□□□□ -1.11
SMARCA4P51532 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC8.14□□□□□ -1.11
SMARCA4P51532 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC8.14□□□□□ -1.11
SMARCA4P51532 ARHGAP42P3-201ENST00000443989 2508 ntBASIC8.13□□□□□ -1.11
SMARCA4P51532 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SMARCA4P51532 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC8.13□□□□□ -1.11
SMARCA4P51532 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SMARCA4P51532 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SMARCA4P51532 YY1P1-201ENST00000427625 668 ntBASIC8.13□□□□□ -1.11
SMARCA4P51532 AC006326.1-201ENST00000445465 787 ntBASIC8.13□□□□□ -1.11
SMARCA4P51532 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC8.13□□□□□ -1.11
SMARCA4P51532 uc_338.13-201ENST00000618243 179 ntBASIC8.13□□□□□ -1.11
SMARCA4P51532 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC8.13□□□□□ -1.11
SMARCA4P51532 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SMARCA4P51532 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC8.13□□□□□ -1.11
SMARCA4P51532 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SMARCA4P51532 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SMARCA4P51532 AC090220.1-201ENST00000593078 1699 ntBASIC8.12□□□□□ -1.11
SMARCA4P51532 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.12□□□□□ -1.11
SMARCA4P51532 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.12□□□□□ -1.11
SMARCA4P51532 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.12□□□□□ -1.11
SMARCA4P51532 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SMARCA4P51532 RNU6-761P-201ENST00000384148 107 ntBASIC8.12□□□□□ -1.11
SMARCA4P51532 TRIM36-IT1-201ENST00000503723 881 ntBASIC8.12□□□□□ -1.11
SMARCA4P51532 MIR4286-201ENST00000580651 93 ntBASIC8.12□□□□□ -1.11
SMARCA4P51532 MIR8059-201ENST00000620427 81 ntBASIC8.12□□□□□ -1.11
SMARCA4P51532 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC8.12□□□□□ -1.11
SMARCA4P51532 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SMARCA4P51532 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SMARCA4P51532 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.11□□□□□ -1.11
SMARCA4P51532 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMARCA4P51532 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC8.11□□□□□ -1.11
SMARCA4P51532 MIR331-201ENST00000362302 94 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.11□□□□□ -1.11
SMARCA4P51532 CDRT1-208ENST00000630868 794 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMARCA4P51532 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC8.11□□□□□ -1.11
SMARCA4P51532 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
SMARCA4P51532 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC8.11□□□□□ -1.11
SMARCA4P51532 AC093829.1-201ENST00000506662 1618 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 AC018628.1-201ENST00000624147 3819 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMARCA4P51532 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMARCA4P51532 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC8.11□□□□□ -1.11
SMARCA4P51532 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SMARCA4P51532 AC008549.2-201ENST00000333482 706 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMARCA4P51532 RPL23AP38-201ENST00000423801 469 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 CKS1BP6-201ENST00000424932 240 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC8.11□□□□□ -1.11
SMARCA4P51532 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC8.11□□□□□ -1.11
SMARCA4P51532 AC093166.2-201ENST00000455969 1017 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 VN1R105P-201ENST00000486595 910 ntBASIC8.11□□□□□ -1.11
SMARCA4P51532 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
SMARCA4P51532 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMARCA4P51532 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC8.11□□□□□ -1.11
SMARCA4P51532 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMARCA4P51532 AC020656.2-201ENST00000613291 5309 ntBASIC8.1□□□□□ -1.11
SMARCA4P51532 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMARCA4P51532 AC104260.2-201ENST00000623551 3497 ntBASIC8.1□□□□□ -1.11
SMARCA4P51532 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMARCA4P51532 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMARCA4P51532 MIR554-201ENST00000384874 96 ntBASIC8.1□□□□□ -1.11
SMARCA4P51532 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC8.1□□□□□ -1.11
SMARCA4P51532 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SMARCA4P51532 AL358232.1-201ENST00000448030 501 ntBASIC8.1□□□□□ -1.11
SMARCA4P51532 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC8.1□□□□□ -1.11
SMARCA4P51532 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.1□□□□□ -1.11
SMARCA4P51532 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC8.1□□□□□ -1.11
SMARCA4P51532 HNRNPCP4-201ENST00000571636 900 ntBASIC8.1□□□□□ -1.11
SMARCA4P51532 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8.1□□□□□ -1.11
SMARCA4P51532 AC021422.1-201ENST00000621212 473 ntBASIC8.1□□□□□ -1.11
SMARCA4P51532 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC8.1□□□□□ -1.11
SMARCA4P51532 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SMARCA4P51532 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.1□□□□□ -1.11
SMARCA4P51532 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SMARCA4P51532 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SMARCA4P51532 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
SMARCA4P51532 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SMARCA4P51532 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms