Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.58□□□□□ -1.52
TUBP50607 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.58□□□□□ -1.52
TUBP50607 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.58□□□□□ -1.52
TUBP50607 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.58□□□□□ -1.52
TUBP50607 AC104229.1-201ENST00000561364 255 ntBASIC5.58□□□□□ -1.52
TUBP50607 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.58□□□□□ -1.52
TUBP50607 AC106730.2-201ENST00000566641 540 ntBASIC5.58□□□□□ -1.52
TUBP50607 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.58□□□□□ -1.52
TUBP50607 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.58□□□□□ -1.52
TUBP50607 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.58□□□□□ -1.52
TUBP50607 AC011374.2-201ENST00000607135 526 ntBASIC5.58□□□□□ -1.52
TUBP50607 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.58□□□□□ -1.52
TUBP50607 AC037198.3-201ENST00000616754 526 ntBASIC5.58□□□□□ -1.52
TUBP50607 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TUBP50607 CYP4F35P-202ENST00000636121 390 ntBASIC5.58□□□□□ -1.52
TUBP50607 AC005332.5-201ENST00000591222 2919 ntBASIC5.58□□□□□ -1.52
TUBP50607 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TUBP50607 AC093311.1-201ENST00000506586 2021 ntBASIC5.58□□□□□ -1.52
TUBP50607 GVINP1-202ENST00000531871 7271 ntBASIC5.58□□□□□ -1.52
TUBP50607 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TUBP50607 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TUBP50607 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TUBP50607 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TUBP50607 AL445437.1-201ENST00000623157 3087 ntBASIC5.58□□□□□ -1.52
TUBP50607 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TUBP50607 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TUBP50607 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TUBP50607 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.58□□□□□ -1.52
TUBP50607 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TUBP50607 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.58□□□□□ -1.52
TUBP50607 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 TRIM51GP-201ENST00000534741 1350 ntBASIC5.57□□□□□ -1.52
TUBP50607 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 SNORA17.1-201ENST00000362945 126 ntBASIC5.57□□□□□ -1.52
TUBP50607 RNA5SP507-201ENST00000363603 121 ntBASIC5.57□□□□□ -1.52
TUBP50607 U8.4-201ENST00000363626 134 ntBASIC5.57□□□□□ -1.52
TUBP50607 RNU1-146P-201ENST00000364015 165 ntBASIC5.57□□□□□ -1.52
TUBP50607 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 SNORA70-201ENST00000384436 135 ntBASIC5.57□□□□□ -1.52
TUBP50607 RNU6-244P-201ENST00000391028 104 ntBASIC5.57□□□□□ -1.52
TUBP50607 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 OR4K12P-201ENST00000406538 961 ntBASIC5.57□□□□□ -1.52
TUBP50607 RPL23AP27-201ENST00000415161 451 ntBASIC5.57□□□□□ -1.52
TUBP50607 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.57□□□□□ -1.52
TUBP50607 PNRC2P1-201ENST00000423940 420 ntBASIC5.57□□□□□ -1.52
TUBP50607 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.57□□□□□ -1.52
TUBP50607 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.57□□□□□ -1.52
TUBP50607 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.57□□□□□ -1.52
TUBP50607 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.57□□□□□ -1.52
TUBP50607 AC097499.1-201ENST00000444277 208 ntBASIC5.57□□□□□ -1.52
TUBP50607 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.57□□□□□ -1.52
TUBP50607 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 AC008379.1-201ENST00000463655 464 ntBASIC5.57□□□□□ -1.52
TUBP50607 RN7SL515P-201ENST00000463999 297 ntBASIC5.57□□□□□ -1.52
TUBP50607 RPS27AP16-201ENST00000492222 470 ntBASIC5.57□□□□□ -1.52
TUBP50607 RPS4XP20-201ENST00000505751 772 ntBASIC5.57□□□□□ -1.52
TUBP50607 RNA5SP373-201ENST00000517271 95 ntBASIC5.57□□□□□ -1.52
TUBP50607 SEPT10P1-201ENST00000517342 1162 ntBASIC5.57□□□□□ -1.52
TUBP50607 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 AC024940.3-201ENST00000538551 316 ntBASIC5.57□□□□□ -1.52
TUBP50607 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.57□□□□□ -1.52
TUBP50607 HMGN2P6-201ENST00000551091 273 ntBASIC5.57□□□□□ -1.52
TUBP50607 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.57□□□□□ -1.52
TUBP50607 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.57□□□□□ -1.52
TUBP50607 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 AC044860.2-201ENST00000561005 179 ntBASIC5.57□□□□□ -1.52
TUBP50607 AC084759.1-201ENST00000561168 290 ntBASIC5.57□□□□□ -1.52
TUBP50607 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 MIR4443-201ENST00000585052 53 ntBASIC5.57□□□□□ -1.52
TUBP50607 AC006116.7-201ENST00000590141 756 ntBASIC5.57□□□□□ -1.52
TUBP50607 VN1R84P-201ENST00000593697 235 ntBASIC5.57□□□□□ -1.52
TUBP50607 AC005252.1-201ENST00000604518 1063 ntBASIC5.57□□□□□ -1.52
TUBP50607 AC023813.4-201ENST00000607580 580 ntBASIC5.57□□□□□ -1.52
TUBP50607 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.57□□□□□ -1.52
TUBP50607 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.57□□□□□ -1.52
TUBP50607 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 MIR7155-201ENST00000615925 56 ntBASIC5.57□□□□□ -1.52
TUBP50607 BNIP3P41-202ENST00000616656 861 ntBASIC5.57□□□□□ -1.52
TUBP50607 AC068880.4-201ENST00000623082 495 ntBASIC5.57□□□□□ -1.52
TUBP50607 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.57□□□□□ -1.52
TUBP50607 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TUBP50607 AC100757.1-201ENST00000616872 1835 ntBASIC5.57□□□□□ -1.52
TUBP50607 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.57□□□□□ -1.52
TUBP50607 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TUBP50607 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms