Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.23□□□□□ -1.57
LHX1P48742 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.23□□□□□ -1.57
LHX1P48742 AC127024.5-201ENST00000580085 462 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.23□□□□□ -1.57
LHX1P48742 AC100827.5-201ENST00000615883 426 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.23□□□□□ -1.57
LHX1P48742 BX005214.3-202ENST00000619809 325 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AP000648.2-201ENST00000624182 404 ntBASIC5.23□□□□□ -1.57
LHX1P48742 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 SAMMSON-226ENST00000642089 1582 ntBASIC5.23□□□□□ -1.57
LHX1P48742 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LHX1P48742 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 AC132825.1-201ENST00000463573 2247 ntBASIC5.23□□□□□ -1.57
LHX1P48742 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LHX1P48742 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LHX1P48742 RN7SKP16-201ENST00000410180 299 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC114755.2-201ENST00000413520 361 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC007738.1-201ENST00000413892 348 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.22□□□□□ -1.57
LHX1P48742 USP9YP9-201ENST00000429406 715 ntBASIC5.22□□□□□ -1.57
LHX1P48742 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.22□□□□□ -1.57
LHX1P48742 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.22□□□□□ -1.57
LHX1P48742 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX1P48742 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.22□□□□□ -1.57
LHX1P48742 Z99127.2-201ENST00000441426 334 ntBASIC5.22□□□□□ -1.57
LHX1P48742 MRPL35P2-201ENST00000448009 511 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX1P48742 AC234781.3-201ENST00000452540 973 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX1P48742 AURKAPS2-201ENST00000454983 333 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC093166.2-201ENST00000455969 1017 ntBASIC5.22□□□□□ -1.57
LHX1P48742 RN7SL517P-201ENST00000462240 305 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC021660.1-201ENST00000465006 554 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC063943.1-201ENST00000465434 453 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC090543.1-201ENST00000492168 485 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX1P48742 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX1P48742 FABP5P6-201ENST00000510588 409 ntBASIC5.22□□□□□ -1.57
LHX1P48742 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
LHX1P48742 AC105031.1-201ENST00000518550 476 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.22□□□□□ -1.57
LHX1P48742 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.22□□□□□ -1.57
LHX1P48742 MIR3667-201ENST00000581025 74 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC006363.1-201ENST00000603806 463 ntBASIC5.22□□□□□ -1.57
LHX1P48742 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 AC010424.2-201ENST00000607594 443 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC007497.1-201ENST00000610421 561 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC105105.5-201ENST00000622635 1294 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC073592.7-201ENST00000623659 507 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.22□□□□□ -1.57
LHX1P48742 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 AC002525.1-201ENST00000624392 1622 ntBASIC5.22□□□□□ -1.57
LHX1P48742 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 MAPK10-328ENST00000641553 4009 ntBASIC5.22□□□□□ -1.57
LHX1P48742 AC068446.1-201ENST00000556425 1549 ntBASIC5.22□□□□□ -1.57
LHX1P48742 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.22□□□□□ -1.57
LHX1P48742 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LHX1P48742 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LHX1P48742 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LHX1P48742 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
LHX1P48742 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LHX1P48742 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.21□□□□□ -1.57
LHX1P48742 AC011447.7-201ENST00000624228 1590 ntBASIC5.21□□□□□ -1.57
LHX1P48742 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LHX1P48742 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 HSPA8P14-201ENST00000552265 1805 ntBASIC5.21□□□□□ -1.58
LHX1P48742 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LHX1P48742 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
LHX1P48742 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.21□□□□□ -1.58
LHX1P48742 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 AC013442.1-201ENST00000397347 228 ntBASIC5.21□□□□□ -1.58
LHX1P48742 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 AL357515.1-201ENST00000402967 542 ntBASIC5.21□□□□□ -1.58
LHX1P48742 RNA5SP113-201ENST00000410486 84 ntBASIC5.21□□□□□ -1.58
LHX1P48742 RNA5SP345-201ENST00000410646 108 ntBASIC5.21□□□□□ -1.58
LHX1P48742 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.21□□□□□ -1.58
LHX1P48742 TBCAP2-201ENST00000416175 326 ntBASIC5.21□□□□□ -1.58
LHX1P48742 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.21□□□□□ -1.58
LHX1P48742 AC073052.1-201ENST00000440417 714 ntBASIC5.21□□□□□ -1.58
LHX1P48742 OR1H1P-201ENST00000448731 937 ntBASIC5.21□□□□□ -1.58
LHX1P48742 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.21□□□□□ -1.58
LHX1P48742 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms