Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ZNF885P-201ENST00000420174 1098 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AC090960.1-201ENST00000421072 306 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 BX119904.4-201ENST00000424402 301 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AL590399.2-201ENST00000427536 309 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 FO393419.3-201ENST00000428741 282 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 CFL1P1-202ENST00000432948 411 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 MTCYBP42-201ENST00000444653 1130 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 CALM1P2-201ENST00000452941 448 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AL133445.1-201ENST00000467051 452 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 RPL23AP44-201ENST00000482216 473 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 IGLV2-28-201ENST00000520681 304 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 PMS2P3-207ENST00000529061 717 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AL356057.1-201ENST00000533798 831 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC6A4P31645 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 OR11H3P-201ENST00000554547 982 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.72□□□□□ -1.49
SLC6A4P31645 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AP001267.4-201ENST00000602598 545 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 DPRXP5-201ENST00000604662 539 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AL445423.1-201ENST00000609941 536 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AL159169.2-201ENST00000610061 1269 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 SDR42E1P1-201ENST00000611327 477 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 FRG1HP-204ENST00000617940 757 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AC005840.5-201ENST00000619166 599 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 AL158062.1-201ENST00000619632 745 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.72□□□□□ -1.49
SLC6A4P31645 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.72□□□□□ -1.49
SLC6A4P31645 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SLC6A4P31645 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC6A4P31645 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
SLC6A4P31645 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.72□□□□□ -1.49
SLC6A4P31645 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC6A4P31645 MT-RNR2-201ENST00000387347 1559 ntBASIC5.72□□□□□ -1.49
SLC6A4P31645 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SLC6A4P31645 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SLC6A4P31645 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SLC6A4P31645 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.71□□□□□ -1.49
SLC6A4P31645 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A4P31645 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A4P31645 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 U3.10-201ENST00000364459 214 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 RN7SKP6-201ENST00000364795 319 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A4P31645 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 Y_RNA.472-201ENST00000384322 102 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 RNU6-549P-201ENST00000384433 107 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 MIR142-201ENST00000384835 87 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 MIR551A-201ENST00000385042 96 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 MIR105-2-201ENST00000385083 81 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 SNORD65C-201ENST00000390962 71 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 RNU6-1242P-201ENST00000391052 103 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AP000357.1-201ENST00000409926 1165 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 RPL35AP24-201ENST00000413846 330 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 BTF3P8-201ENST00000414577 526 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A4P31645 HSPE1P16-201ENST00000426640 348 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A4P31645 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A4P31645 RPL34P26-201ENST00000445636 354 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 EXTL2P1-201ENST00000446218 416 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AL035407.2-201ENST00000454090 378 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC6A4P31645 ATG12P2-201ENST00000456830 416 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 HSPE1P22-201ENST00000456856 327 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 AC011225.1-201ENST00000457751 369 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 snoU13.29-201ENST00000459370 104 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 BET1P1-201ENST00000482276 359 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A4P31645 AC090058.1-201ENST00000498788 435 ntBASIC5.71□□□□□ -1.5
SLC6A4P31645 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms