Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 TRAV35-201ENST00000390462 330 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 BTF3P10-201ENST00000433415 495 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 RPL21P89-201ENST00000444021 467 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 AC006326.1-201ENST00000445465 787 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 AL358232.1-201ENST00000448030 501 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 RPL23AP53-201ENST00000521854 457 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.47□□□□□ -1.53
COL4A5P29400 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 AL356863.1-201ENST00000623378 1080 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL4A5P29400 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.46□□□□□ -1.53
COL4A5P29400 AC090220.1-201ENST00000593078 1699 ntBASIC5.46□□□□□ -1.53
COL4A5P29400 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL4A5P29400 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL4A5P29400 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
COL4A5P29400 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL4A5P29400 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
COL4A5P29400 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A5P29400 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A5P29400 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A5P29400 RPS3AP25-201ENST00000411660 793 ntBASIC5.46□□□□□ -1.54
COL4A5P29400 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.46□□□□□ -1.54
COL4A5P29400 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A5P29400 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A5P29400 ISCUP1-201ENST00000454451 448 ntBASIC5.46□□□□□ -1.54
COL4A5P29400 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.46□□□□□ -1.54
COL4A5P29400 AC008958.1-201ENST00000511047 682 ntBASIC5.46□□□□□ -1.54
COL4A5P29400 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A5P29400 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.46□□□□□ -1.54
COL4A5P29400 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A5P29400 AC090181.2-201ENST00000602975 672 ntBASIC5.46□□□□□ -1.54
COL4A5P29400 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A5P29400 AC005899.7-201ENST00000618199 588 ntBASIC5.46□□□□□ -1.54
COL4A5P29400 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A5P29400 AC140479.6-201ENST00000633535 357 ntBASIC5.46□□□□□ -1.54
COL4A5P29400 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
COL4A5P29400 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A5P29400 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A5P29400 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A5P29400 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A5P29400 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL4A5P29400 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A5P29400 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A5P29400 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A5P29400 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A5P29400 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A5P29400 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A5P29400 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A5P29400 RNA5SP387-201ENST00000364226 106 ntBASIC5.45□□□□□ -1.54
COL4A5P29400 SDHCP2-201ENST00000398565 501 ntBASIC5.45□□□□□ -1.54
COL4A5P29400 EIF4A1P3-201ENST00000411521 244 ntBASIC5.45□□□□□ -1.54
COL4A5P29400 NPM1P26-201ENST00000426339 738 ntBASIC5.45□□□□□ -1.54
COL4A5P29400 AL935212.3-201ENST00000450729 284 ntBASIC5.45□□□□□ -1.54
COL4A5P29400 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.45□□□□□ -1.54
COL4A5P29400 AL132838.2-201ENST00000492041 314 ntBASIC5.45□□□□□ -1.54
COL4A5P29400 AL133372.1-201ENST00000493565 745 ntBASIC5.45□□□□□ -1.54
COL4A5P29400 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.45□□□□□ -1.54
COL4A5P29400 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A5P29400 LINC00622-201ENST00000562811 1570 ntBASIC5.45□□□□□ -1.54
COL4A5P29400 AL591135.1-201ENST00000401578 5914 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 UBBP2-201ENST00000376781 231 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 Z98745.1-201ENST00000402553 494 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 RPL21P67-201ENST00000402896 478 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 RPL23AP38-201ENST00000423801 469 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 AL117339.2-201ENST00000430475 180 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 AC093166.2-201ENST00000455969 1017 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 RN7SL132P-201ENST00000478131 296 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 AC098799.3-201ENST00000506095 438 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A5P29400 AC109635.6-201ENST00000525487 1113 ntBASIC5.44□□□□□ -1.54
COL4A5P29400 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.44□□□□□ -1.54
COL4A5P29400 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL4A5P29400 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.44□□□□□ -1.54
COL4A5P29400 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A5P29400 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A5P29400 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A5P29400 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL4A5P29400 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A5P29400 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A5P29400 RN7SKP33-201ENST00000410942 340 ntBASIC5.43□□□□□ -1.54
COL4A5P29400 AL356276.2-201ENST00000435919 558 ntBASIC5.43□□□□□ -1.54
COL4A5P29400 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A5P29400 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.43□□□□□ -1.54
COL4A5P29400 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A5P29400 RPS27AP13-201ENST00000498403 237 ntBASIC5.43□□□□□ -1.54
COL4A5P29400 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A5P29400 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A5P29400 AL137141.1-201ENST00000624622 4836 ntBASIC5.43□□□□□ -1.54
COL4A5P29400 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A5P29400 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COL4A5P29400 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A5P29400 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A5P29400 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A5P29400 RNU6-761P-201ENST00000384148 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms