Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL512430.2-201ENST00000406786 339 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN6P29350 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 SCAND3P1-201ENST00000439854 1060 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN6P29350 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN6P29350 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 RN7SL610P-201ENST00000463845 291 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN6P29350 AC004815.1-201ENST00000484185 331 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 SNRPCP2-201ENST00000504370 475 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 ENPP7P9-201ENST00000514456 627 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 AC104997.1-201ENST00000519761 717 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN6P29350 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN6P29350 OR11J2P-201ENST00000555298 907 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 DPRXP4-201ENST00000578053 568 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 MIR4472-2-201ENST00000582069 67 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN6P29350 AC008536.1-201ENST00000602872 669 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 AL121612.2-201ENST00000612261 482 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 MIR6730-201ENST00000622213 67 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 AC015908.5-201ENST00000623289 343 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN6P29350 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN6P29350 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN6P29350 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN6P29350 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN6P29350 AP000756.2-201ENST00000624168 2567 ntBASIC4.79□□□□□ -1.64
PTPN6P29350 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN6P29350 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN6P29350 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN6P29350 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN6P29350 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN6P29350 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
PTPN6P29350 PHKBP1-201ENST00000450951 1951 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 PANDAR-201ENST00000629595 1506 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 RPL23P2-201ENST00000320371 421 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 U8.4-201ENST00000363626 134 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 UBBP2-201ENST00000376781 231 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 SNORA70-201ENST00000384436 135 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 AC093719.1-202ENST00000392735 373 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 AL034374.1-201ENST00000406329 351 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN6P29350 SETP15-201ENST00000412724 337 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 TMBIM7P-201ENST00000418074 855 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 AC013429.2-201ENST00000418798 781 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 AL353597.2-202ENST00000434901 373 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 TXNP5-201ENST00000441043 315 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 RPS18P6-201ENST00000476880 458 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 OR5M14P-201ENST00000506803 618 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN6P29350 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 GTF2F2P1-201ENST00000511083 675 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN6P29350 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 RNU6-513P-201ENST00000516104 104 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 SNORA48.9-201ENST00000516419 162 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN6P29350 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN6P29350 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN6P29350 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN6P29350 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 AP005262.1-201ENST00000582646 997 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN6P29350 BMS1P7-201ENST00000602440 1052 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 TAS2R6P-201ENST00000605022 826 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN6P29350 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN6P29350 AC145207.9-201ENST00000623802 325 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 DDX18P3-201ENST00000404856 2007 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
PTPN6P29350 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN6P29350 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 AC104118.1-201ENST00000607625 1589 ntBASIC4.78□□□□□ -1.64
PTPN6P29350 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN6P29350 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms