Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.48□□□□□ -1.21
RXRBP28702 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 HMGB1P23-201ENST00000518743 568 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AP004247.1-201ENST00000531556 1289 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.48□□□□□ -1.21
RXRBP28702 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.48□□□□□ -1.21
RXRBP28702 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 AC023813.2-201ENST00000564321 469 ntBASIC7.48□□□□□ -1.21
RXRBP28702 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RXRBP28702 CBX3P2-202ENST00000583365 535 ntBASIC7.48□□□□□ -1.21
RXRBP28702 PRELID3BP3-201ENST00000584963 545 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 AF131215.7-201ENST00000602443 707 ntBASIC7.48□□□□□ -1.21
RXRBP28702 RPL26P30-202ENST00000602923 645 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AL136363.2-201ENST00000604173 851 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC090607.5-201ENST00000615692 224 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC007490.1-201ENST00000624321 703 ntBASIC7.48□□□□□ -1.21
RXRBP28702 AC132825.8-201ENST00000640783 297 ntBASIC7.48□□□□□ -1.21
RXRBP28702 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.48□□□□□ -1.21
RXRBP28702 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.48□□□□□ -1.21
RXRBP28702 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 BX005019.1-201ENST00000561881 1810 ntBASIC7.48□□□□□ -1.21
RXRBP28702 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RXRBP28702 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
RXRBP28702 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
RXRBP28702 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.47□□□□□ -1.21
RXRBP28702 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 MIR133B-201ENST00000362210 119 ntBASIC7.47□□□□□ -1.21
RXRBP28702 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 Y_RNA.472-201ENST00000384322 102 ntBASIC7.47□□□□□ -1.21
RXRBP28702 RNU2-50P-201ENST00000410494 143 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AL445183.3-201ENST00000414168 502 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AL713922.1-201ENST00000416477 747 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.47□□□□□ -1.21
RXRBP28702 RPL18P10-201ENST00000425606 538 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.47□□□□□ -1.21
RXRBP28702 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 OR6D1P-201ENST00000436165 939 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AC006335.2-201ENST00000437993 330 ntBASIC7.47□□□□□ -1.21
RXRBP28702 Z99127.2-201ENST00000441426 334 ntBASIC7.47□□□□□ -1.21
RXRBP28702 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 AP000542.1-201ENST00000448473 371 ntBASIC7.47□□□□□ -1.21
RXRBP28702 MTCYBP1-201ENST00000454315 1119 ntBASIC7.47□□□□□ -1.21
RXRBP28702 RPL7AP28-201ENST00000464513 571 ntBASIC7.47□□□□□ -1.21
RXRBP28702 RN7SL352P-201ENST00000466002 277 ntBASIC7.47□□□□□ -1.21
RXRBP28702 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
RXRBP28702 AC074255.1-201ENST00000511259 501 ntBASIC7.47□□□□□ -1.21
RXRBP28702 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.47□□□□□ -1.21
RXRBP28702 SNORA70.11-201ENST00000515987 138 ntBASIC7.47□□□□□ -1.21
RXRBP28702 SNORA70.13-201ENST00000516116 138 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.47□□□□□ -1.21
RXRBP28702 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RXRBP28702 AP006289.1-201ENST00000538089 277 ntBASIC7.47□□□□□ -1.21
RXRBP28702 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.47□□□□□ -1.21
RXRBP28702 HSPE1P2-201ENST00000554777 306 ntBASIC7.47□□□□□ -1.21
RXRBP28702 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.47□□□□□ -1.21
RXRBP28702 ACTR3BP3-201ENST00000565577 979 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC7.47□□□□□ -1.21
RXRBP28702 MTCO3P24-201ENST00000572729 782 ntBASIC7.47□□□□□ -1.21
RXRBP28702 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.47□□□□□ -1.21
RXRBP28702 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.47□□□□□ -1.21
RXRBP28702 AP002906.1-201ENST00000603405 233 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AC005034.4-201ENST00000603612 899 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.47□□□□□ -1.21
RXRBP28702 AC091193.1-201ENST00000604640 448 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AP000255.1-201ENST00000610276 676 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AC091931.1-201ENST00000623488 728 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AC010608.2-201ENST00000624830 470 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AC074101.1-201ENST00000637861 241 ntBASIC7.47□□□□□ -1.21
RXRBP28702 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RXRBP28702 CASC19-260ENST00000641828 2001 ntBASIC7.47□□□□□ -1.21
RXRBP28702 AC111188.2-201ENST00000529697 1387 ntBASIC7.46□□□□□ -1.21
RXRBP28702 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RXRBP28702 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RXRBP28702 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.21
RXRBP28702 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.46□□□□□ -1.21
RXRBP28702 MTND5P24-201ENST00000438892 1767 ntBASIC7.46□□□□□ -1.21
RXRBP28702 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RXRBP28702 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
RXRBP28702 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.46□□□□□ -1.21
RXRBP28702 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RXRBP28702 AL353763.1-201ENST00000624467 1628 ntBASIC7.46□□□□□ -1.21
RXRBP28702 AC087565.3-202ENST00000642085 1603 ntBASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms