Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC107304.1-201ENST00000604229 296 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC124916.2-201ENST00000604416 224 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC087752.4-201ENST00000605911 462 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC012360.2-201ENST00000609349 391 ntBASIC5.49□□□□□ -1.53
CD40P25942 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 AC025594.3-201ENST00000613068 790 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC015540.1-201ENST00000615828 501 ntBASIC5.49□□□□□ -1.53
CD40P25942 MIR6071-201ENST00000616741 78 ntBASIC5.49□□□□□ -1.53
CD40P25942 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.49□□□□□ -1.53
CD40P25942 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 AC073488.6-201ENST00000632293 754 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC026634.1-201ENST00000634369 198 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC006927.3-201ENST00000638789 384 ntBASIC5.49□□□□□ -1.53
CD40P25942 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 TRIM51GP-201ENST00000534741 1350 ntBASIC5.49□□□□□ -1.53
CD40P25942 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.49□□□□□ -1.53
CD40P25942 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 AC016745.2-201ENST00000608834 3443 ntBASIC5.48□□□□□ -1.53
CD40P25942 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CD40P25942 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CD40P25942 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 RNU6-1119P-201ENST00000384349 108 ntBASIC5.48□□□□□ -1.53
CD40P25942 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CD40P25942 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CD40P25942 RPS6P23-201ENST00000413224 722 ntBASIC5.48□□□□□ -1.53
CD40P25942 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 AC007394.1-201ENST00000421941 531 ntBASIC5.48□□□□□ -1.53
CD40P25942 AL354707.3-201ENST00000427308 331 ntBASIC5.48□□□□□ -1.53
CD40P25942 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 AC007679.3-201ENST00000434035 414 ntBASIC5.48□□□□□ -1.53
CD40P25942 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 LARP1BP3-201ENST00000437229 869 ntBASIC5.48□□□□□ -1.53
CD40P25942 USP9YP29-201ENST00000445112 563 ntBASIC5.48□□□□□ -1.53
CD40P25942 RPL5P10-201ENST00000445207 894 ntBASIC5.48□□□□□ -1.53
CD40P25942 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.48□□□□□ -1.53
CD40P25942 IGBP1P3-201ENST00000447449 1000 ntBASIC5.48□□□□□ -1.53
CD40P25942 RPL23AP15-201ENST00000450202 459 ntBASIC5.48□□□□□ -1.53
CD40P25942 VN1R38P-201ENST00000450265 887 ntBASIC5.48□□□□□ -1.53
CD40P25942 RPL5P32-201ENST00000454085 879 ntBASIC5.48□□□□□ -1.53
CD40P25942 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.48□□□□□ -1.53
CD40P25942 RPS15AP1-201ENST00000457423 391 ntBASIC5.48□□□□□ -1.53
CD40P25942 RN7SL326P-201ENST00000477493 296 ntBASIC5.48□□□□□ -1.53
CD40P25942 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 RPS4XP15-201ENST00000489210 795 ntBASIC5.48□□□□□ -1.53
CD40P25942 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 AC096754.1-201ENST00000508904 818 ntBASIC5.48□□□□□ -1.53
CD40P25942 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 EIF3KP3-201ENST00000514461 639 ntBASIC5.48□□□□□ -1.53
CD40P25942 RNU6-202P-201ENST00000515998 96 ntBASIC5.48□□□□□ -1.53
CD40P25942 RNU6-720P-201ENST00000516363 108 ntBASIC5.48□□□□□ -1.53
CD40P25942 RNU6-347P-201ENST00000516658 105 ntBASIC5.48□□□□□ -1.53
CD40P25942 MTND1P5-201ENST00000517906 940 ntBASIC5.48□□□□□ -1.53
CD40P25942 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.48□□□□□ -1.53
CD40P25942 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 AC036111.2-201ENST00000533247 901 ntBASIC5.48□□□□□ -1.53
CD40P25942 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.48□□□□□ -1.53
CD40P25942 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 PSMB7P1-201ENST00000556349 514 ntBASIC5.48□□□□□ -1.53
CD40P25942 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 AC018552.1-201ENST00000562099 811 ntBASIC5.48□□□□□ -1.53
CD40P25942 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.48□□□□□ -1.53
CD40P25942 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.48□□□□□ -1.53
CD40P25942 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.48□□□□□ -1.53
CD40P25942 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms