Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC6P09630 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
HOXC6P09630 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HOXC6P09630 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 AC022893.2-201ENST00000564832 3296 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC6P09630 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC6P09630 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC6P09630 OR1L6-202ENST00000373684 1044 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 RSU1P3-201ENST00000412878 835 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC6P09630 AL606490.8-201ENST00000441624 319 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 AL353718.1-201ENST00000451028 517 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC6P09630 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXC6P09630 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC6P09630 AP003102.1-201ENST00000525638 661 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC6P09630 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC6P09630 ATP5J2P6-201ENST00000565203 266 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC6P09630 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXC6P09630 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 AC020915.5-201ENST00000596836 964 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 OR4H6P-202ENST00000603819 340 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 AC104763.3-201ENST00000613765 618 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 AC109809.1-201ENST00000619665 545 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC6P09630 AC097520.1-201ENST00000624435 385 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC6P09630 ZNF652P1-201ENST00000442420 1309 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 AC092451.3-201ENST00000625067 1343 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC6P09630 AC010928.1-201ENST00000592477 1447 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 AP000432.2-201ENST00000624164 2048 ntBASIC5.62□□□□□ -1.51
HOXC6P09630 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC6P09630 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC6P09630 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXC6P09630 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC6P09630 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
HOXC6P09630 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
HOXC6P09630 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
HOXC6P09630 SNORA72.3-201ENST00000365074 132 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AC007618.1-201ENST00000366455 732 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC6P09630 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC6P09630 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXC6P09630 AL049697.2-201ENST00000403708 294 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AL390316.1-201ENST00000406279 553 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 AC114755.2-201ENST00000413520 361 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 NCLP2-201ENST00000416078 1462 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AC004690.1-201ENST00000418216 328 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 RPL23AP1-201ENST00000428990 471 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 MTCO1P57-201ENST00000432182 261 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC6P09630 HMGB1P4-201ENST00000455362 567 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 SAMM50P1-201ENST00000455403 1399 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 RPS5P7-201ENST00000456664 608 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 ECM1P2-201ENST00000503354 1577 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC6P09630 MTND4P9-201ENST00000507819 1346 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AC010460.2-201ENST00000509054 677 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AC140134.1-201ENST00000511830 3544 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AC027369.5-201ENST00000533838 755 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC6P09630 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC6P09630 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 BNIP3P31-201ENST00000604515 566 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AC007497.1-201ENST00000610421 561 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 AC016597.2-201ENST00000613256 341 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms