Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL160275.2-201ENST00000412010 394 ntBASIC5.26□□□□□ -1.57
TPM1P09493 TBCAP2-201ENST00000416175 326 ntBASIC5.26□□□□□ -1.57
TPM1P09493 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.26□□□□□ -1.57
TPM1P09493 HMGB3P9-201ENST00000441799 583 ntBASIC5.26□□□□□ -1.57
TPM1P09493 AC000111.2-201ENST00000448200 210 ntBASIC5.26□□□□□ -1.57
TPM1P09493 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.26□□□□□ -1.57
TPM1P09493 NDUFA5P8-201ENST00000449019 346 ntBASIC5.26□□□□□ -1.57
TPM1P09493 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM1P09493 RPSAP39-201ENST00000467439 883 ntBASIC5.26□□□□□ -1.57
TPM1P09493 RN7SL222P-201ENST00000476452 299 ntBASIC5.26□□□□□ -1.57
TPM1P09493 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.26□□□□□ -1.57
TPM1P09493 AC108693.1-201ENST00000496068 432 ntBASIC5.26□□□□□ -1.57
TPM1P09493 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.26□□□□□ -1.57
TPM1P09493 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.26□□□□□ -1.57
TPM1P09493 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.26□□□□□ -1.57
TPM1P09493 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.26□□□□□ -1.57
TPM1P09493 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.26□□□□□ -1.57
TPM1P09493 NDUFA5P11-201ENST00000567995 343 ntBASIC5.26□□□□□ -1.57
TPM1P09493 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.26□□□□□ -1.57
TPM1P09493 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.26□□□□□ -1.57
TPM1P09493 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.26□□□□□ -1.57
TPM1P09493 AC096586.2-201ENST00000610260 441 ntBASIC5.26□□□□□ -1.57
TPM1P09493 AP002505.2-201ENST00000623585 696 ntBASIC5.26□□□□□ -1.57
TPM1P09493 AC138627.1-204ENST00000641894 765 ntBASIC5.26□□□□□ -1.57
TPM1P09493 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TPM1P09493 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TPM1P09493 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM1P09493 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.26□□□□□ -1.57
TPM1P09493 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM1P09493 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.26□□□□□ -1.57
TPM1P09493 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
TPM1P09493 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM1P09493 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM1P09493 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.25□□□□□ -1.57
TPM1P09493 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TPM1P09493 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TPM1P09493 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TPM1P09493 AP001002.1-201ENST00000625148 1513 ntBASIC5.25□□□□□ -1.57
TPM1P09493 OR10J6P-201ENST00000289731 930 ntBASIC5.25□□□□□ -1.57
TPM1P09493 RN7SKP224-201ENST00000364140 325 ntBASIC5.25□□□□□ -1.57
TPM1P09493 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TPM1P09493 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.25□□□□□ -1.57
TPM1P09493 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.25□□□□□ -1.57
TPM1P09493 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.25□□□□□ -1.57
TPM1P09493 AL137845.2-201ENST00000444292 988 ntBASIC5.25□□□□□ -1.57
TPM1P09493 TDGF1P1-201ENST00000445734 527 ntBASIC5.25□□□□□ -1.57
TPM1P09493 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TPM1P09493 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.25□□□□□ -1.57
TPM1P09493 RN7SL741P-201ENST00000482473 289 ntBASIC5.25□□□□□ -1.57
TPM1P09493 HMGB3P13-201ENST00000511263 607 ntBASIC5.25□□□□□ -1.57
TPM1P09493 AF186190.1-201ENST00000517470 480 ntBASIC5.25□□□□□ -1.57
TPM1P09493 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.25□□□□□ -1.57
TPM1P09493 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.25□□□□□ -1.57
TPM1P09493 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.25□□□□□ -1.57
TPM1P09493 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.25□□□□□ -1.57
TPM1P09493 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TPM1P09493 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TPM1P09493 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TPM1P09493 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TPM1P09493 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TPM1P09493 AL672167.1-203ENST00000641299 2975 ntBASIC5.24□□□□□ -1.57
TPM1P09493 MIR143-201ENST00000385300 106 ntBASIC5.24□□□□□ -1.57
TPM1P09493 MIR921-201ENST00000401133 56 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM1P09493 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM1P09493 AC005033.1-201ENST00000428904 813 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM1P09493 RPS17P8-201ENST00000434525 335 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AC093414.1-201ENST00000434712 514 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AL138787.1-202ENST00000437804 898 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.24□□□□□ -1.57
TPM1P09493 RPS26P28-201ENST00000470806 348 ntBASIC5.24□□□□□ -1.57
TPM1P09493 RN7SL717P-201ENST00000478343 297 ntBASIC5.24□□□□□ -1.57
TPM1P09493 RN7SL319P-201ENST00000480656 221 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AC108022.1-201ENST00000493466 478 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM1P09493 PGAM1P13-201ENST00000507497 754 ntBASIC5.24□□□□□ -1.57
TPM1P09493 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 RNA5SP43-201ENST00000516559 110 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM1P09493 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.24□□□□□ -1.57
TPM1P09493 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM1P09493 AL049839.1-201ENST00000556151 657 ntBASIC5.24□□□□□ -1.57
TPM1P09493 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TPM1P09493 SNORD39.2-201ENST00000579995 76 ntBASIC5.24□□□□□ -1.57
TPM1P09493 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 AC130352.1-201ENST00000602979 661 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AL121932.1-201ENST00000605542 214 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AC010424.2-201ENST00000607594 443 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AC004477.3-201ENST00000614061 590 ntBASIC5.24□□□□□ -1.57
TPM1P09493 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 AC107027.3-201ENST00000565095 3473 ntBASIC5.24□□□□□ -1.57
TPM1P09493 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TPM1P09493 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TPM1P09493 Z98755.1-201ENST00000407015 1384 ntBASIC5.24□□□□□ -1.57
TPM1P09493 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
TPM1P09493 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms