Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ATG4AP1-201ENST00000416893 538 ntBASIC5.33□□□□□ -1.56
TPM3P06753 AL590609.2-201ENST00000421430 368 ntBASIC5.33□□□□□ -1.56
TPM3P06753 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.33□□□□□ -1.56
TPM3P06753 AL357520.1-201ENST00000441557 453 ntBASIC5.33□□□□□ -1.56
TPM3P06753 AP000281.1-201ENST00000444036 316 ntBASIC5.33□□□□□ -1.56
TPM3P06753 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM3P06753 AC097484.1-201ENST00000471148 389 ntBASIC5.33□□□□□ -1.56
TPM3P06753 RN7SL97P-201ENST00000486780 299 ntBASIC5.33□□□□□ -1.56
TPM3P06753 RN7SL184P-201ENST00000488308 297 ntBASIC5.33□□□□□ -1.56
TPM3P06753 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM3P06753 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM3P06753 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM3P06753 PPBPP1-201ENST00000510807 373 ntBASIC5.33□□□□□ -1.56
TPM3P06753 NDUFB4P12-201ENST00000513465 390 ntBASIC5.33□□□□□ -1.56
TPM3P06753 RNA5SP228-201ENST00000516232 133 ntBASIC5.33□□□□□ -1.56
TPM3P06753 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM3P06753 AC018442.3-201ENST00000523025 183 ntBASIC5.33□□□□□ -1.56
TPM3P06753 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.33□□□□□ -1.56
TPM3P06753 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM3P06753 OR4A46P-201ENST00000527255 933 ntBASIC5.33□□□□□ -1.56
TPM3P06753 AC005363.1-201ENST00000530779 351 ntBASIC5.33□□□□□ -1.56
TPM3P06753 AP000919.1-201ENST00000582850 985 ntBASIC5.33□□□□□ -1.56
TPM3P06753 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.33□□□□□ -1.56
TPM3P06753 AL589674.2-201ENST00000604304 337 ntBASIC5.33□□□□□ -1.56
TPM3P06753 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.33□□□□□ -1.56
TPM3P06753 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TPM3P06753 AL136164.3-201ENST00000624429 3978 ntBASIC5.33□□□□□ -1.56
TPM3P06753 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TPM3P06753 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TPM3P06753 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM3P06753 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TPM3P06753 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.33□□□□□ -1.56
TPM3P06753 NXF4-202ENST00000416098 1465 ntBASIC5.32□□□□□ -1.56
TPM3P06753 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.32□□□□□ -1.56
TPM3P06753 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM3P06753 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.32□□□□□ -1.56
TPM3P06753 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 RNA5SP183-201ENST00000362452 119 ntBASIC5.32□□□□□ -1.56
TPM3P06753 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TPM3P06753 RNA5SP178-201ENST00000410380 128 ntBASIC5.32□□□□□ -1.56
TPM3P06753 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.32□□□□□ -1.56
TPM3P06753 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM3P06753 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.32□□□□□ -1.56
TPM3P06753 OR51K1P-201ENST00000510214 950 ntBASIC5.32□□□□□ -1.56
TPM3P06753 RNA5SP154-201ENST00000516193 111 ntBASIC5.32□□□□□ -1.56
TPM3P06753 AP002981.1-201ENST00000517692 975 ntBASIC5.32□□□□□ -1.56
TPM3P06753 OR7E128P-201ENST00000532736 1024 ntBASIC5.32□□□□□ -1.56
TPM3P06753 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.32□□□□□ -1.56
TPM3P06753 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
TPM3P06753 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM3P06753 AC007204.2-201ENST00000615022 616 ntBASIC5.32□□□□□ -1.56
TPM3P06753 AL359757.1-201ENST00000623176 255 ntBASIC5.32□□□□□ -1.56
TPM3P06753 AC015908.5-201ENST00000623289 343 ntBASIC5.32□□□□□ -1.56
TPM3P06753 AC067931.1-201ENST00000624190 671 ntBASIC5.32□□□□□ -1.56
TPM3P06753 AC136428.4-201ENST00000634254 1155 ntBASIC5.32□□□□□ -1.56
TPM3P06753 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM3P06753 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM3P06753 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 AC105074.1-201ENST00000623380 3095 ntBASIC5.32□□□□□ -1.56
TPM3P06753 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.32□□□□□ -1.56
TPM3P06753 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TPM3P06753 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM3P06753 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM3P06753 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM3P06753 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TPM3P06753 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM3P06753 OR56A4-201ENST00000330728 1209 ntBASIC5.31□□□□□ -1.56
TPM3P06753 RNU6-984P-201ENST00000363236 109 ntBASIC5.31□□□□□ -1.56
TPM3P06753 RNU1-43P-201ENST00000365052 165 ntBASIC5.31□□□□□ -1.56
TPM3P06753 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TPM3P06753 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM3P06753 PRPF38AP2-201ENST00000438179 851 ntBASIC5.31□□□□□ -1.56
TPM3P06753 SPRYD7P1-201ENST00000443861 570 ntBASIC5.31□□□□□ -1.56
TPM3P06753 AC000111.2-201ENST00000448200 210 ntBASIC5.31□□□□□ -1.56
TPM3P06753 RN7SL222P-201ENST00000476452 299 ntBASIC5.31□□□□□ -1.56
TPM3P06753 AC098583.1-201ENST00000480875 255 ntBASIC5.31□□□□□ -1.56
TPM3P06753 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM3P06753 AC008694.2-201ENST00000517591 306 ntBASIC5.31□□□□□ -1.56
TPM3P06753 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.31□□□□□ -1.56
TPM3P06753 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM3P06753 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.31□□□□□ -1.56
TPM3P06753 AC015912.2-201ENST00000571053 181 ntBASIC5.31□□□□□ -1.56
TPM3P06753 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM3P06753 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM3P06753 AC023509.5-201ENST00000617434 807 ntBASIC5.31□□□□□ -1.56
TPM3P06753 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TPM3P06753 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.31□□□□□ -1.56
TPM3P06753 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM3P06753 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM3P06753 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms