Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC100827.5-201ENST00000615883 426 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 MIR16-2-201ENST00000362117 81 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 RNU1-74P-201ENST00000384108 171 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 SNORA51.8-201ENST00000384234 132 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 MIR589-201ENST00000385238 99 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 GAPDHP15-201ENST00000398586 975 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 ST13P16-201ENST00000401760 781 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 RN7SKP114-201ENST00000410327 279 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AL035246.1-201ENST00000433554 1255 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 KNOP1P3-201ENST00000446933 426 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 REG1CP-206ENST00000447469 496 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 TRY2P-201ENST00000448860 689 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 RN7SL197P-201ENST00000466981 299 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AP001207.2-201ENST00000519490 539 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 HAUS1P3-201ENST00000523909 662 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 BRD9P1-201ENST00000529855 560 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC008147.3-201ENST00000548666 354 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC021851.1-201ENST00000608537 1082 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 AC090116.1-201ENST00000615679 446 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.13□□□□□ -1.43
HLA-DOAP06340 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DOAP06340 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DOAP06340 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 RPL37P18-201ENST00000411602 243 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC098592.2-201ENST00000413158 265 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 SEPT7P8-201ENST00000413308 775 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 VN1R31P-201ENST00000417498 730 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC021876.1-201ENST00000425959 359 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC099670.2-201ENST00000435130 321 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 RAB9AP5-201ENST00000437794 597 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 RAB9AP2-201ENST00000443911 597 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 VN1R40P-201ENST00000455196 941 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 RPS3AP41-201ENST00000462701 778 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC083982.1-201ENST00000485679 344 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 CDH12P4-201ENST00000517835 295 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 CDH12P3-201ENST00000517935 295 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 CDH12P1-201ENST00000518435 295 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC136777.2-201ENST00000522979 358 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 EDDM3DP-201ENST00000554692 434 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.12□□□□□ -1.43
HLA-DOAP06340 AL022067.1-201ENST00000602426 454 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC092954.1-201ENST00000609121 445 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms