Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
COL5A2P05997 AC093829.1-201ENST00000506662 1618 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL5A2P05997 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A2P05997 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.08□□□□□ -1.44
COL5A2P05997 MAPK10-328ENST00000641553 4009 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A2P05997 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 RNA5SP453-201ENST00000362503 119 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.08□□□□□ -1.44
COL5A2P05997 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL5A2P05997 CEACAMP8-201ENST00000413902 580 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 RN7SL542P-201ENST00000467147 294 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 OR8R1P-201ENST00000543943 764 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.08□□□□□ -1.44
COL5A2P05997 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.08□□□□□ -1.44
COL5A2P05997 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.08□□□□□ -1.44
COL5A2P05997 AC099676.1-201ENST00000608886 657 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A2P05997 TRIM51GP-201ENST00000534741 1350 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 AC005261.4-201ENST00000600047 1385 ntBASIC6.08□□□□□ -1.44
COL5A2P05997 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
COL5A2P05997 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
COL5A2P05997 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.07□□□□□ -1.44
COL5A2P05997 CYP1D1P-201ENST00000416662 1433 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL5A2P05997 OR5P1P-201ENST00000299512 925 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 RNU1-132P-201ENST00000364300 164 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A2P05997 E2F6P2-201ENST00000420708 748 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL5A2P05997 snoU13.22-201ENST00000459428 104 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A2P05997 HNRNPRP2-201ENST00000528421 743 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 AL049830.4-201ENST00000555149 351 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 AL049840.6-202ENST00000603373 279 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 AC011815.3-201ENST00000624194 473 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 AC112200.1-201ENST00000625015 234 ntBASIC6.07□□□□□ -1.44
COL5A2P05997 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COL5A2P05997 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A2P05997 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.07□□□□□ -1.44
COL5A2P05997 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL5A2P05997 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.06□□□□□ -1.44
COL5A2P05997 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL5A2P05997 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.06□□□□□ -1.44
COL5A2P05997 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL5A2P05997 MIR372-201ENST00000362225 67 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 AP000580.1-201ENST00000404439 358 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 COX5BP7-201ENST00000414780 274 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 LINC01881-201ENST00000416103 412 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.06□□□□□ -1.44
COL5A2P05997 AC053481.1-201ENST00000467217 306 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 AC098799.1-201ENST00000504752 800 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A2P05997 RPL23AP53-201ENST00000521854 457 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.06□□□□□ -1.44
COL5A2P05997 AC005899.7-201ENST00000618199 588 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 AC009120.7-201ENST00000623452 780 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 AC090506.2-201ENST00000624521 419 ntBASIC6.06□□□□□ -1.44
COL5A2P05997 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL5A2P05997 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A2P05997 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A2P05997 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A2P05997 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A2P05997 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL5A2P05997 OR8G2P-201ENST00000412796 908 ntBASIC6.05□□□□□ -1.44
COL5A2P05997 OR13Z1P-201ENST00000416141 834 ntBASIC6.05□□□□□ -1.44
COL5A2P05997 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.05□□□□□ -1.44
COL5A2P05997 RGS17P1-201ENST00000423358 553 ntBASIC6.05□□□□□ -1.44
COL5A2P05997 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.05□□□□□ -1.44
COL5A2P05997 CR383656.1-201ENST00000484916 377 ntBASIC6.05□□□□□ -1.44
COL5A2P05997 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.05□□□□□ -1.44
COL5A2P05997 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.05□□□□□ -1.44
COL5A2P05997 RNA5SP143-201ENST00000516936 115 ntBASIC6.05□□□□□ -1.44
COL5A2P05997 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC6.05□□□□□ -1.44
COL5A2P05997 AC005868.1-201ENST00000536421 331 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms