Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 GJA6P-201ENST00000415117 1042 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 OR2AM1P-201ENST00000422137 422 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 snoU13.20-201ENST00000459180 104 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC109462.1-201ENST00000491087 368 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 RN7SL808P-201ENST00000496066 299 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC113398.2-201ENST00000507630 558 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 MTCO3P42-201ENST00000509488 518 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 COX6B1P5-201ENST00000509843 249 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 MTCO3P39-201ENST00000514812 518 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 RN7SKP147-201ENST00000517154 244 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 RNU6-709P-201ENST00000517257 104 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AP005901.4-201ENST00000577336 569 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 MIR4691-201ENST00000583764 85 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 EIF1P5-201ENST00000585002 234 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 SLC25A36P1-201ENST00000590111 465 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 OR7E18P-201ENST00000592589 702 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AL445222.1-201ENST00000607259 628 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AL627230.1-201ENST00000613077 211 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AL591926.8-201ENST00000616876 211 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 SYT14P1-202ENST00000600441 1448 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 HSPD1P14-201ENST00000432666 1618 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DPB1P04440 AC008758.3-201ENST00000507003 1829 ntBASIC4.28□□□□□ -1.72
HLA-DPB1P04440 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
HLA-DPB1P04440 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 CASC19-281ENST00000642118 1554 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 OR56B2P-201ENST00000317102 954 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 RNU4-4P-201ENST00000364588 130 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC007068.1-201ENST00000396690 844 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 RNA5SP296-201ENST00000410523 111 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC073850.1-201ENST00000449243 255 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 RPL7AP28-201ENST00000464513 571 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 RNA5SP43-201ENST00000516559 110 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 RNA5SP392-201ENST00000516905 112 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC013701.1-201ENST00000522657 465 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 GLRXP2-201ENST00000555594 321 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 TVP23CP2-201ENST00000571473 623 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 IRF5P1-201ENST00000504852 2164 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC104118.1-201ENST00000607625 1589 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AC091046.3-201ENST00000631455 1574 ntBASIC4.27□□□□□ -1.73
HLA-DPB1P04440 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPB1P04440 AL121950.1-201ENST00000624993 2077 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms