Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CD74P04233 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.1□□□□□ -1.75
CD74P04233 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CD74P04233 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CD74P04233 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.1□□□□□ -1.75
CD74P04233 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD74P04233 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.1□□□□□ -1.75
CD74P04233 U3.25-201ENST00000391209 220 ntBASIC4.1□□□□□ -1.75
CD74P04233 EIF4A1P3-201ENST00000411521 244 ntBASIC4.1□□□□□ -1.75
CD74P04233 AL160275.2-201ENST00000412010 394 ntBASIC4.1□□□□□ -1.75
CD74P04233 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.1□□□□□ -1.75
CD74P04233 AL121776.1-201ENST00000429337 372 ntBASIC4.1□□□□□ -1.75
CD74P04233 AP000281.1-201ENST00000444036 316 ntBASIC4.1□□□□□ -1.75
CD74P04233 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.1□□□□□ -1.75
CD74P04233 TCEA1P1-201ENST00000449716 880 ntBASIC4.1□□□□□ -1.75
CD74P04233 IGHV5-78-201ENST00000450948 295 ntBASIC4.1□□□□□ -1.75
CD74P04233 RPSAP39-201ENST00000467439 883 ntBASIC4.1□□□□□ -1.75
CD74P04233 AC100832.1-201ENST00000471945 383 ntBASIC4.1□□□□□ -1.75
CD74P04233 AC015864.1-201ENST00000496512 544 ntBASIC4.1□□□□□ -1.75
CD74P04233 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.1□□□□□ -1.75
CD74P04233 AC010350.1-201ENST00000504908 231 ntBASIC4.1□□□□□ -1.75
CD74P04233 AC112191.2-201ENST00000522428 333 ntBASIC4.1□□□□□ -1.75
CD74P04233 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.1□□□□□ -1.75
CD74P04233 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.1□□□□□ -1.75
CD74P04233 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.1□□□□□ -1.75
CD74P04233 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.1□□□□□ -1.75
CD74P04233 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.1□□□□□ -1.75
CD74P04233 BX323046.1-201ENST00000610145 535 ntBASIC4.1□□□□□ -1.75
CD74P04233 AC022467.1-201ENST00000614738 749 ntBASIC4.1□□□□□ -1.75
CD74P04233 AC022960.2-201ENST00000616300 666 ntBASIC4.1□□□□□ -1.75
CD74P04233 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.1□□□□□ -1.75
CD74P04233 MIR8080-201ENST00000622224 89 ntBASIC4.1□□□□□ -1.75
CD74P04233 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.1□□□□□ -1.75
CD74P04233 AC087821.1-201ENST00000623639 567 ntBASIC4.1□□□□□ -1.75
CD74P04233 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.1□□□□□ -1.75
CD74P04233 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 VN2R3P-201ENST00000422626 1412 ntBASIC4.1□□□□□ -1.75
CD74P04233 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CD74P04233 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 OR14L1P-202ENST00000641545 3009 ntBASIC4.1□□□□□ -1.75
CD74P04233 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD74P04233 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD74P04233 AC008758.3-201ENST00000507003 1829 ntBASIC4.09□□□□□ -1.75
CD74P04233 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
CD74P04233 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD74P04233 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD74P04233 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD74P04233 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD74P04233 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD74P04233 AL136116.2-201ENST00000404020 785 ntBASIC4.09□□□□□ -1.75
CD74P04233 ARL4AP5-201ENST00000404372 599 ntBASIC4.09□□□□□ -1.75
CD74P04233 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD74P04233 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CD74P04233 AL080315.1-201ENST00000406055 466 ntBASIC4.09□□□□□ -1.75
CD74P04233 OR2AM1P-201ENST00000422137 422 ntBASIC4.09□□□□□ -1.75
CD74P04233 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD74P04233 Z74021.1-201ENST00000423610 407 ntBASIC4.09□□□□□ -1.75
CD74P04233 AC108075.1-201ENST00000424692 529 ntBASIC4.09□□□□□ -1.75
CD74P04233 AL121578.1-201ENST00000428051 892 ntBASIC4.09□□□□□ -1.75
CD74P04233 RPL36AP39-201ENST00000445859 318 ntBASIC4.09□□□□□ -1.75
CD74P04233 ATP5G1P3-201ENST00000463301 410 ntBASIC4.09□□□□□ -1.75
CD74P04233 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CD74P04233 RPL35AP19-201ENST00000469425 329 ntBASIC4.09□□□□□ -1.75
CD74P04233 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.09□□□□□ -1.75
CD74P04233 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.09□□□□□ -1.75
CD74P04233 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.09□□□□□ -1.75
CD74P04233 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.09□□□□□ -1.75
CD74P04233 RNU6-709P-201ENST00000517257 104 ntBASIC4.09□□□□□ -1.75
CD74P04233 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.09□□□□□ -1.75
CD74P04233 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.09□□□□□ -1.75
CD74P04233 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CD74P04233 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.09□□□□□ -1.75
CD74P04233 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.09□□□□□ -1.75
CD74P04233 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD74P04233 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.09□□□□□ -1.75
CD74P04233 AC007225.2-201ENST00000562529 256 ntBASIC4.09□□□□□ -1.75
CD74P04233 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.09□□□□□ -1.75
CD74P04233 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.09□□□□□ -1.75
CD74P04233 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.09□□□□□ -1.75
CD74P04233 AC004477.3-201ENST00000614061 590 ntBASIC4.09□□□□□ -1.75
CD74P04233 LINC00901.1-201ENST00000617252 152 ntBASIC4.09□□□□□ -1.75
CD74P04233 AC055839.1-201ENST00000634467 498 ntBASIC4.09□□□□□ -1.75
CD74P04233 AL049767.1-202ENST00000637826 242 ntBASIC4.09□□□□□ -1.75
CD74P04233 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.09□□□□□ -1.75
CD74P04233 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD74P04233 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CD74P04233 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.09□□□□□ -1.75
CD74P04233 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD74P04233 PHKBP1-201ENST00000450951 1951 ntBASIC4.09□□□□□ -1.76
CD74P04233 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.76
CD74P04233 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CD74P04233 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD74P04233 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms