Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 AC006042.3-201ENST00000454684 1469 ntBASIC2.8□□□□□ -1.96
APOBP04114 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 U8.11-201ENST00000384699 133 ntBASIC2.8□□□□□ -1.96
APOBP04114 U8.12-201ENST00000384701 133 ntBASIC2.8□□□□□ -1.96
APOBP04114 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 U8.18-201ENST00000459285 133 ntBASIC2.8□□□□□ -1.96
APOBP04114 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
APOBP04114 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
APOBP04114 AC026403.1-201ENST00000518938 295 ntBASIC2.8□□□□□ -1.96
APOBP04114 AP000619.3-201ENST00000535634 1127 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 MGP-201ENST00000228938 694 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 RNA5SP453-201ENST00000362503 119 ntBASIC2.8□□□□□ -1.96
APOBP04114 MT-RNR1-201ENST00000389680 954 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC007068.1-201ENST00000396690 844 ntBASIC2.8□□□□□ -1.96
APOBP04114 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 AC021876.1-201ENST00000425959 359 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC2.8□□□□□ -1.96
APOBP04114 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC2.8□□□□□ -1.96
APOBP04114 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC2.8□□□□□ -1.96
APOBP04114 SNORA73.2-201ENST00000364946 201 ntBASIC2.8□□□□□ -1.96
APOBP04114 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC2.8□□□□□ -1.96
APOBP04114 RPL23AP52-201ENST00000439311 478 ntBASIC2.8□□□□□ -1.96
APOBP04114 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 AL133547.1-201ENST00000448546 220 ntBASIC2.8□□□□□ -1.96
APOBP04114 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 AC007991.1-201ENST00000522680 631 ntBASIC2.8□□□□□ -1.96
APOBP04114 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 OFD1P9Y-201ENST00000417699 1491 ntBASIC2.8□□□□□ -1.96
APOBP04114 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOBP04114 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 AC092376.2-201ENST00000622621 4116 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC007618.1-201ENST00000366455 732 ntBASIC2.8□□□□□ -1.96
APOBP04114 CCL7-202ENST00000394627 696 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 RNA5SP36-201ENST00000410197 133 ntBASIC2.8□□□□□ -1.96
APOBP04114 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.8□□□□□ -1.96
APOBP04114 RGS17P1-201ENST00000423358 553 ntBASIC2.8□□□□□ -1.96
APOBP04114 AP000907.1-201ENST00000428428 510 ntBASIC2.8□□□□□ -1.96
APOBP04114 AL136231.1-201ENST00000429407 730 ntBASIC2.8□□□□□ -1.96
APOBP04114 CYCSP43-201ENST00000438233 310 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC016772.1-201ENST00000444170 1261 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC2.8□□□□□ -1.96
APOBP04114 AC135352.1-201ENST00000506173 1418 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC023632.4-201ENST00000517783 191 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC2.8□□□□□ -1.96
APOBP04114 HSPE1P5-201ENST00000561489 272 ntBASIC2.8□□□□□ -1.96
APOBP04114 MIR4286-201ENST00000580651 93 ntBASIC2.8□□□□□ -1.96
APOBP04114 AL161729.3-201ENST00000603533 673 ntBASIC2.8□□□□□ -1.96
APOBP04114 AC020978.9-201ENST00000624380 1141 ntBASIC2.8□□□□□ -1.96
APOBP04114 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
APOBP04114 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 EIF2AP4-201ENST00000424793 1781 ntBASIC2.79□□□□□ -1.96
APOBP04114 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBP04114 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
APOBP04114 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC2.79□□□□□ -1.96
APOBP04114 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 AL355596.1-201ENST00000565399 3996 ntBASIC2.79□□□□□ -1.96
APOBP04114 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
APOBP04114 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
APOBP04114 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
APOBP04114 MIR218-2-201ENST00000385006 110 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms