Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.38□□□□□ -1.71
SPTA1P02549 AC069157.1-201ENST00000421749 137 ntBASIC4.38□□□□□ -1.71
SPTA1P02549 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.38□□□□□ -1.71
SPTA1P02549 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.38□□□□□ -1.71
SPTA1P02549 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.38□□□□□ -1.71
SPTA1P02549 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.38□□□□□ -1.71
SPTA1P02549 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.38□□□□□ -1.71
SPTA1P02549 SOX5P1-201ENST00000524155 1127 ntBASIC4.38□□□□□ -1.71
SPTA1P02549 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.38□□□□□ -1.71
SPTA1P02549 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.38□□□□□ -1.71
SPTA1P02549 MIR3200-201ENST00000580767 85 ntBASIC4.38□□□□□ -1.71
SPTA1P02549 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.38□□□□□ -1.71
SPTA1P02549 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
SPTA1P02549 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.38□□□□□ -1.71
SPTA1P02549 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.38□□□□□ -1.71
SPTA1P02549 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.38□□□□□ -1.71
SPTA1P02549 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SPTA1P02549 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
SPTA1P02549 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SPTA1P02549 LRRC37BP1-201ENST00000398851 714 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.37□□□□□ -1.71
SPTA1P02549 RPL7AP52-201ENST00000458096 790 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 AC023632.4-201ENST00000517783 191 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 BUD31P1-201ENST00000521828 359 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.37□□□□□ -1.71
SPTA1P02549 SRGNP1-201ENST00000603392 451 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 AP005019.3-201ENST00000620418 560 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SPTA1P02549 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.37□□□□□ -1.71
SPTA1P02549 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SPTA1P02549 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SPTA1P02549 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SPTA1P02549 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.37□□□□□ -1.71
SPTA1P02549 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SPTA1P02549 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SPTA1P02549 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 Z92545.1-201ENST00000411782 234 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 RN7SL98P-201ENST00000462271 300 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.37□□□□□ -1.71
SPTA1P02549 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.37□□□□□ -1.71
SPTA1P02549 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SPTA1P02549 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
SPTA1P02549 AC007529.1-201ENST00000418574 2178 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SPTA1P02549 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.37□□□□□ -1.71
SPTA1P02549 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.37□□□□□ -1.71
SPTA1P02549 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SPTA1P02549 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.36□□□□□ -1.71
SPTA1P02549 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPTA1P02549 AC009238.2-201ENST00000431026 355 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AC016772.1-201ENST00000444170 1261 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AC000111.2-201ENST00000448200 210 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTA1P02549 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SPTA1P02549 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.36□□□□□ -1.71
SPTA1P02549 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SPTA1P02549 RNU1-103P-201ENST00000516502 125 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AC105129.1-201ENST00000560250 297 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 MIR3138-201ENST00000585238 82 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTA1P02549 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTA1P02549 ZYXP1-201ENST00000617638 118 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AC015908.5-201ENST00000623289 343 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AL356121.2-201ENST00000624715 780 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AL049536.1-201ENST00000625043 744 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.36□□□□□ -1.71
SPTA1P02549 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPTA1P02549 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPTA1P02549 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPTA1P02549 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SPTA1P02549 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SPTA1P02549 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPTA1P02549 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPTA1P02549 RN7SKP153-201ENST00000365026 316 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTA1P02549 U3.35-201ENST00000408405 208 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 RPL23AP94-201ENST00000512518 302 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AP001804.1-201ENST00000526868 919 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.36□□□□□ -1.71
SPTA1P02549 RPL21P12-201ENST00000559810 515 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms