Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.5□□□□□ -1.53
COL4A1P02462 CDC27P1-201ENST00000445384 715 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 AL359073.1-201ENST00000448036 403 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.5□□□□□ -1.53
COL4A1P02462 NPM1P5-201ENST00000557228 838 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 BNIP3P5-201ENST00000562290 498 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 AC127024.5-201ENST00000580085 462 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 AC113403.1-201ENST00000604910 193 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 AP005019.3-201ENST00000620418 560 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 AC140479.6-201ENST00000633535 357 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 AL139254.3-201ENST00000641097 674 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL4A1P02462 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A1P02462 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
COL4A1P02462 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A1P02462 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 AC104118.1-201ENST00000607625 1589 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
COL4A1P02462 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A1P02462 MFSD8-220ENST00000641243 1422 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 SNORA70C-201ENST00000384538 135 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 ATP5F1P2-201ENST00000398143 760 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 MFSD13B-201ENST00000420133 1290 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 RPS12P10-201ENST00000427031 377 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 RPL34P6-201ENST00000432390 345 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A1P02462 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A1P02462 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A1P02462 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.5□□□□□ -1.53
COL4A1P02462 AC010168.2-201ENST00000562691 5428 ntBASIC5.5□□□□□ -1.53
COL4A1P02462 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COL4A1P02462 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 AC011755.1-201ENST00000623763 2049 ntBASIC5.49□□□□□ -1.53
COL4A1P02462 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A1P02462 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.49□□□□□ -1.53
COL4A1P02462 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
COL4A1P02462 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A1P02462 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
COL4A1P02462 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 RN7SKP280-201ENST00000364196 304 ntBASIC5.49□□□□□ -1.53
COL4A1P02462 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.49□□□□□ -1.53
COL4A1P02462 CASKP1-201ENST00000412870 582 ntBASIC5.49□□□□□ -1.53
COL4A1P02462 PCNPP4-201ENST00000414817 517 ntBASIC5.49□□□□□ -1.53
COL4A1P02462 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.49□□□□□ -1.53
COL4A1P02462 BTF3P10-201ENST00000433415 495 ntBASIC5.49□□□□□ -1.53
COL4A1P02462 AL356276.2-201ENST00000435919 558 ntBASIC5.49□□□□□ -1.53
COL4A1P02462 AC104651.2-201ENST00000447549 528 ntBASIC5.49□□□□□ -1.53
COL4A1P02462 AC114755.5-201ENST00000447760 831 ntBASIC5.49□□□□□ -1.53
COL4A1P02462 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.49□□□□□ -1.53
COL4A1P02462 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.49□□□□□ -1.53
COL4A1P02462 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.49□□□□□ -1.53
COL4A1P02462 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
COL4A1P02462 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A1P02462 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.49□□□□□ -1.53
COL4A1P02462 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A1P02462 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
COL4A1P02462 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A1P02462 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.48□□□□□ -1.53
COL4A1P02462 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.48□□□□□ -1.53
COL4A1P02462 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
COL4A1P02462 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL4A1P02462 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A1P02462 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.48□□□□□ -1.53
COL4A1P02462 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A1P02462 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL4A1P02462 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.48□□□□□ -1.53
COL4A1P02462 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.48□□□□□ -1.53
COL4A1P02462 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
COL4A1P02462 AC008958.1-201ENST00000511047 682 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 SNORA31.9-201ENST00000516429 84 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.48□□□□□ -1.53
COL4A1P02462 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.48□□□□□ -1.53
COL4A1P02462 AP003730.1-201ENST00000524605 285 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 PSMB7P1-201ENST00000556349 514 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms