Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.08□□□□□ -1.6
LDLRP01130 RPS26P41-201ENST00000450370 284 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 AC107015.1-201ENST00000466902 747 ntBASIC5.08□□□□□ -1.6
LDLRP01130 RPL7P6-201ENST00000480903 738 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 AC106806.2-201ENST00000509365 500 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AP001922.4-201ENST00000526967 290 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.08□□□□□ -1.6
LDLRP01130 OR11H3P-201ENST00000554547 982 ntBASIC5.08□□□□□ -1.6
LDLRP01130 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 MRPS21P7-201ENST00000566937 238 ntBASIC5.08□□□□□ -1.6
LDLRP01130 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 AC005242.1-201ENST00000585658 438 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AC034229.4-201ENST00000607861 441 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AC126915.2-201ENST00000610957 190 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AC135068.5-201ENST00000624197 983 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AC097372.4-201ENST00000625025 466 ntBASIC5.08□□□□□ -1.6
LDLRP01130 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.08□□□□□ -1.6
LDLRP01130 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 AC093775.1-201ENST00000624154 1868 ntBASIC5.08□□□□□ -1.6
LDLRP01130 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.08□□□□□ -1.6
LDLRP01130 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 AC000374.1-201ENST00000434698 1745 ntBASIC5.08□□□□□ -1.6
LDLRP01130 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LDLRP01130 SOCS5P3-201ENST00000425115 1576 ntBASIC5.08□□□□□ -1.6
LDLRP01130 ZNF733P-202ENST00000444809 1573 ntBASIC5.08□□□□□ -1.6
LDLRP01130 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
LDLRP01130 TCP1P3-201ENST00000414406 1498 ntBASIC5.07□□□□□ -1.6
LDLRP01130 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LDLRP01130 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LDLRP01130 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 OR9G4-201ENST00000302957 984 ntBASIC5.07□□□□□ -1.6
LDLRP01130 RN7SKP28-201ENST00000364770 305 ntBASIC5.07□□□□□ -1.6
LDLRP01130 RNU4-2-201ENST00000365668 141 ntBASIC5.07□□□□□ -1.6
LDLRP01130 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LDLRP01130 MIR141-201ENST00000384975 95 ntBASIC5.07□□□□□ -1.6
LDLRP01130 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LDLRP01130 RANP4-201ENST00000413361 655 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 AC104333.2-201ENST00000422630 192 ntBASIC5.07□□□□□ -1.6
LDLRP01130 MTCYBP32-201ENST00000427945 1084 ntBASIC5.07□□□□□ -1.6
LDLRP01130 VDAC1P6-201ENST00000430062 855 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.07□□□□□ -1.6
LDLRP01130 GXYLT1P1-201ENST00000446657 490 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.07□□□□□ -1.6
LDLRP01130 AC009220.1-201ENST00000451614 275 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 RPS18P6-201ENST00000476880 458 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC015908.1-201ENST00000478739 476 ntBASIC5.07□□□□□ -1.6
LDLRP01130 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 AC104629.1-201ENST00000494226 508 ntBASIC5.07□□□□□ -1.6
LDLRP01130 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.07□□□□□ -1.6
LDLRP01130 NIFKP7-201ENST00000503365 834 ntBASIC5.07□□□□□ -1.6
LDLRP01130 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.07□□□□□ -1.6
LDLRP01130 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.07□□□□□ -1.6
LDLRP01130 RNU6-1102P-201ENST00000516149 96 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.07□□□□□ -1.6
LDLRP01130 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.07□□□□□ -1.6
LDLRP01130 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 AC068993.1-201ENST00000546724 589 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC127381.1-201ENST00000555979 939 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC022884.2-201ENST00000578535 580 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.07□□□□□ -1.6
LDLRP01130 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.07□□□□□ -1.6
LDLRP01130 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.07□□□□□ -1.6
LDLRP01130 KATNBL1P5-201ENST00000605015 517 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC005021.1-201ENST00000608730 355 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC009163.6-201ENST00000612367 342 ntBASIC5.07□□□□□ -1.6
LDLRP01130 AC025016.1-201ENST00000616746 682 ntBASIC5.07□□□□□ -1.6
LDLRP01130 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 MIR6839-201ENST00000620425 113 ntBASIC5.07□□□□□ -1.6
LDLRP01130 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LDLRP01130 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
LDLRP01130 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LDLRP01130 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms