Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.5□□□□□ -1.53
PROM1O43490 AP003033.1-201ENST00000527244 415 ntBASIC5.5□□□□□ -1.53
PROM1O43490 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.5□□□□□ -1.53
PROM1O43490 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.5□□□□□ -1.53
PROM1O43490 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.5□□□□□ -1.53
PROM1O43490 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.5□□□□□ -1.53
PROM1O43490 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.5□□□□□ -1.53
PROM1O43490 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.5□□□□□ -1.53
PROM1O43490 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 AL360219.1-201ENST00000610230 366 ntBASIC5.5□□□□□ -1.53
PROM1O43490 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 MTND4P5-201ENST00000435821 1374 ntBASIC5.5□□□□□ -1.53
PROM1O43490 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.5□□□□□ -1.53
PROM1O43490 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 AC138907.8-201ENST00000623981 2256 ntBASIC5.5□□□□□ -1.53
PROM1O43490 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 AP004607.3-201ENST00000530354 3915 ntBASIC5.5□□□□□ -1.53
PROM1O43490 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PROM1O43490 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.49□□□□□ -1.53
PROM1O43490 AC004158.1-201ENST00000564508 4319 ntBASIC5.49□□□□□ -1.53
PROM1O43490 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PROM1O43490 RNU1-150P-201ENST00000362491 162 ntBASIC5.49□□□□□ -1.53
PROM1O43490 RNU6-236P-201ENST00000363886 106 ntBASIC5.49□□□□□ -1.53
PROM1O43490 RNA5SP500-201ENST00000364486 119 ntBASIC5.49□□□□□ -1.53
PROM1O43490 RNU4-7P-201ENST00000364758 141 ntBASIC5.49□□□□□ -1.53
PROM1O43490 RNA5SP284-201ENST00000384547 118 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AL078595.1-201ENST00000404458 226 ntBASIC5.49□□□□□ -1.53
PROM1O43490 MIR1203-201ENST00000408812 85 ntBASIC5.49□□□□□ -1.53
PROM1O43490 BTF3P8-201ENST00000414577 526 ntBASIC5.49□□□□□ -1.53
PROM1O43490 SEPT2P1-201ENST00000419651 180 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 AL035660.1-201ENST00000422041 222 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 GTF2IP2-201ENST00000424290 697 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.49□□□□□ -1.53
PROM1O43490 RPS27AP6-201ENST00000427962 448 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 AC126120.1-201ENST00000431082 470 ntBASIC5.49□□□□□ -1.53
PROM1O43490 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.49□□□□□ -1.53
PROM1O43490 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 HMGB3P6-201ENST00000444896 598 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AL161636.2-201ENST00000445179 927 ntBASIC5.49□□□□□ -1.53
PROM1O43490 EXTL2P1-201ENST00000446218 416 ntBASIC5.49□□□□□ -1.53
PROM1O43490 SEPT14P24-201ENST00000447236 180 ntBASIC5.49□□□□□ -1.53
PROM1O43490 MRPL35P2-201ENST00000448009 511 ntBASIC5.49□□□□□ -1.53
PROM1O43490 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.49□□□□□ -1.53
PROM1O43490 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 AC093166.4-201ENST00000457867 318 ntBASIC5.49□□□□□ -1.53
PROM1O43490 RPL5P13-201ENST00000462840 709 ntBASIC5.49□□□□□ -1.53
PROM1O43490 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.49□□□□□ -1.53
PROM1O43490 OR2A20P-203ENST00000498397 1268 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.49□□□□□ -1.53
PROM1O43490 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 RPL7L1P4-201ENST00000513004 707 ntBASIC5.49□□□□□ -1.53
PROM1O43490 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 AC092593.2-201ENST00000513866 913 ntBASIC5.49□□□□□ -1.53
PROM1O43490 RPS27AP18-201ENST00000515536 459 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AC010306.1-201ENST00000523223 1117 ntBASIC5.49□□□□□ -1.53
PROM1O43490 OR8Q1P-201ENST00000526467 655 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.49□□□□□ -1.53
PROM1O43490 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
PROM1O43490 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.49□□□□□ -1.53
PROM1O43490 AL513327.3-201ENST00000602618 469 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AP002906.1-201ENST00000603405 233 ntBASIC5.49□□□□□ -1.53
PROM1O43490 AC126175.1-201ENST00000617041 758 ntBASIC5.49□□□□□ -1.53
PROM1O43490 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.49□□□□□ -1.53
PROM1O43490 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 AC005261.4-201ENST00000600047 1385 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms