Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN3O15551 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN3O15551 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN3O15551 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLDN3O15551 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN3O15551 AC025574.1-201ENST00000554784 1653 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 NCLP2-201ENST00000416078 1462 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 AC103591.2-201ENST00000265259 766 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDN3O15551 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDN3O15551 RNA5SP191-201ENST00000362585 102 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDN3O15551 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN3O15551 RNA5SP87-201ENST00000384155 118 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN3O15551 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN3O15551 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN3O15551 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN3O15551 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN3O15551 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN3O15551 AC010733.1-201ENST00000451515 401 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN3O15551 RN7SL558P-201ENST00000497468 299 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 AC018442.3-201ENST00000523025 183 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN3O15551 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN3O15551 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN3O15551 UBE2FP2-201ENST00000566646 462 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 MIR4675-201ENST00000577898 77 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN3O15551 AC006272.2-201ENST00000594725 163 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDN3O15551 AL512782.1-201ENST00000603093 364 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 AL135786.2-201ENST00000608422 615 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 AC116651.1-201ENST00000609724 556 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 AC015914.2-201ENST00000618167 288 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN3O15551 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CLDN3O15551 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN3O15551 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN3O15551 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN3O15551 AC009643.2-201ENST00000603543 1448 ntBASIC5.29□□□□□ -1.56
CLDN3O15551 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN3O15551 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN3O15551 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN3O15551 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN3O15551 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN3O15551 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN3O15551 USP9YP9-201ENST00000429406 715 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN3O15551 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN3O15551 FCF1P7-201ENST00000451185 558 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN3O15551 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN3O15551 AC069304.1-201ENST00000491593 704 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN3O15551 RNU6-709P-201ENST00000517257 104 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN3O15551 BUD31P1-201ENST00000521828 359 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN3O15551 AP001880.2-201ENST00000538233 448 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN3O15551 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN3O15551 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN3O15551 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN3O15551 AL049830.4-201ENST00000555149 351 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 AC018552.1-201ENST00000562099 811 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN3O15551 AC022726.1-201ENST00000587475 207 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 AL391358.1-201ENST00000605342 190 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN3O15551 FAM27B-201ENST00000610601 213 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 AC004241.3-201ENST00000611728 517 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN3O15551 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN3O15551 RLIMP2-201ENST00000427891 1563 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN3O15551 AC053481.2-202ENST00000582394 1500 ntBASIC5.28□□□□□ -1.56
CLDN3O15551 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN3O15551 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
CLDN3O15551 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN3O15551 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN3O15551 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLDN3O15551 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN3O15551 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN3O15551 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLDN3O15551 U3.30-201ENST00000391308 210 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN3O15551 AC004074.1-201ENST00000421810 1063 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 SOCS5P3-201ENST00000425115 1576 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN3O15551 NRBF2P3-201ENST00000432731 865 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 RPS17P8-201ENST00000434525 335 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 HMGB3P10-201ENST00000434734 572 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN3O15551 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN3O15551 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN3O15551 RPS5P7-201ENST00000456664 608 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 GYG1P1-201ENST00000460864 698 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms