Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1AO00322 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
UPK1AO00322 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
UPK1AO00322 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
UPK1AO00322 RNU1-94P-201ENST00000362627 173 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 SNORA51.8-201ENST00000384234 132 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 MIR105-2-201ENST00000385083 81 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AL589647.1-201ENST00000402485 466 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AL080315.1-201ENST00000406055 466 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1AO00322 CBX1P3-201ENST00000413296 527 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1AO00322 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1AO00322 SUMO2P1-206ENST00000445436 284 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.47□□□□□ -1.69
UPK1AO00322 OR52J1P-201ENST00000450596 932 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 EIF2S2P5-201ENST00000457635 968 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AC114982.2-201ENST00000461396 358 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AP000942.1-201ENST00000463969 747 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 RN7SL515P-201ENST00000463999 297 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.47□□□□□ -1.69
UPK1AO00322 BUD31P1-201ENST00000521828 359 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1AO00322 CYCSP28-201ENST00000534284 321 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AC005000.1-201ENST00000536192 288 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1AO00322 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.47□□□□□ -1.69
UPK1AO00322 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1AO00322 MIR5699-201ENST00000578903 90 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1AO00322 MIR7155-201ENST00000615925 56 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 AL359757.1-201ENST00000623176 255 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 BTBD10P1-201ENST00000549824 1352 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 NCLP2-201ENST00000416078 1462 ntBASIC4.47□□□□□ -1.69
UPK1AO00322 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1AO00322 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1AO00322 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1AO00322 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.46□□□□□ -1.69
UPK1AO00322 HSPD1P14-201ENST00000432666 1618 ntBASIC4.46□□□□□ -1.69
UPK1AO00322 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
UPK1AO00322 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
UPK1AO00322 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.46□□□□□ -1.69
UPK1AO00322 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
UPK1AO00322 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1AO00322 OR56B2P-201ENST00000317102 954 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 MTHFD2P5-201ENST00000320415 844 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
UPK1AO00322 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1AO00322 AL109941.1-201ENST00000401925 229 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 HDGFP1-201ENST00000405943 252 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.46□□□□□ -1.7
UPK1AO00322 RPL21P108-201ENST00000413857 481 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 CEACAMP8-201ENST00000413902 580 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1AO00322 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1AO00322 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1AO00322 PTMAP6-201ENST00000439110 327 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 RPSAP41-201ENST00000439695 860 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.46□□□□□ -1.7
UPK1AO00322 AC010733.1-201ENST00000451515 401 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1AO00322 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1AO00322 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1AO00322 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1AO00322 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.46□□□□□ -1.7
UPK1AO00322 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1AO00322 AC133555.2-201ENST00000550213 292 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 AC044860.2-201ENST00000561005 179 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 AC133644.2-201ENST00000608142 540 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 FAM27B-201ENST00000610601 213 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1AO00322 AC087385.3-201ENST00000620477 187 ntBASIC4.46□□□□□ -1.7
UPK1AO00322 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
UPK1AO00322 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1AO00322 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.45□□□□□ -1.7
UPK1AO00322 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPK1AO00322 TTC39DP-201ENST00000416781 1688 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UPK1AO00322 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPK1AO00322 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
UPK1AO00322 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPK1AO00322 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.45□□□□□ -1.7
UPK1AO00322 RN7SKP167-201ENST00000411047 285 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 VDAC1P9-201ENST00000412766 841 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 COX6B1P1-201ENST00000415962 213 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 AC013268.2-201ENST00000420753 337 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 AC007559.1-201ENST00000428736 355 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms