Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA2E9PIF3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.68□□□□□ -1.66
NPIPA2E9PIF3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPIPA2E9PIF3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 NUDT19P3-201ENST00000404698 555 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 MIR1182-201ENST00000408363 97 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 MTCYBP29-201ENST00000436327 1006 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 MTND3P4-201ENST00000453537 303 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 RPS6P2-201ENST00000454208 705 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 HMGN2P25-201ENST00000486956 268 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 BRD9P1-201ENST00000529855 560 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 MIR4480-201ENST00000582492 71 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC133552.5-201ENST00000604266 540 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 AC011626.1-201ENST00000604710 562 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 MIR6839-201ENST00000620425 113 ntBASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPIPA2E9PIF3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 RN7SKP115-201ENST00000363177 317 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AL035419.1-201ENST00000397037 564 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 OR6K4P-201ENST00000423179 955 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC104837.2-201ENST00000427236 424 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC046176.1-201ENST00000435260 1170 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 SCAND3P1-201ENST00000439854 1060 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 RPS3AP41-201ENST00000462701 778 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 RN7SL814P-201ENST00000487715 300 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 CDH12P4-201ENST00000517835 295 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 CDH12P3-201ENST00000517935 295 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 CDH12P1-201ENST00000518435 295 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 OR5AZ1P-201ENST00000527448 943 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 PCNPP1-201ENST00000552501 511 ntBASIC4.66□□□□□ -1.66
NPIPA2E9PIF3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms