Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC005033.1-201ENST00000428904 813 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AL772161.1-201ENST00000439130 476 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 RPL34P26-201ENST00000445636 354 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 TRY2P-201ENST00000448860 689 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 MEMO1P4-201ENST00000453590 386 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC010627.1-201ENST00000503819 1294 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC113420.1-201ENST00000507903 571 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC093752.1-206ENST00000511823 336 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 SNORA70.11-201ENST00000515987 138 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 SNORA70.13-201ENST00000516116 138 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AP000859.1-201ENST00000525536 307 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 LRRC6P1-201ENST00000532188 885 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 MIR4675-201ENST00000577898 77 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 MIR4311-201ENST00000580794 100 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC091057.2-201ENST00000602594 792 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 ELOCP35-201ENST00000604289 336 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC090510.2-201ENST00000617465 629 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC119674.1-212ENST00000641155 993 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 AC139713.2-210ENST00000641741 992 ntBASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC187A0A096LP49 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.34□□□□□ -1.56
CCDC187A0A096LP49 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.34□□□□□ -1.56
CCDC187A0A096LP49 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC187A0A096LP49 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CCDC187A0A096LP49 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AP000473.2-201ENST00000602659 1537 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AL606537.1-201ENST00000607258 2011 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 MFSD8-220ENST00000641243 1422 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 RPL23P2-201ENST00000320371 421 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 RNU1-59P-201ENST00000364829 162 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 MIR550A3-201ENST00000390735 95 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 HMGB3P31-201ENST00000413333 595 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AL449283.1-202ENST00000418249 604 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 VN1R21P-201ENST00000426703 765 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AC096992.1-201ENST00000459808 709 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 DUTP1-201ENST00000493631 470 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AC112673.1-201ENST00000513168 575 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 RNU6-1004P-201ENST00000516584 111 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 CDH12P4-201ENST00000517835 295 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 CDH12P3-201ENST00000517935 295 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 CDH12P1-201ENST00000518435 295 ntBASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC187A0A096LP49 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms