Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 HPRT1P1-201ENST00000509498 657 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 AC087477.6-201ENST00000559595 843 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 IMMP1LP1-201ENST00000605170 488 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 AC016252.1-201ENST00000609721 474 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 AC083809.1-201ENST00000615051 472 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 MIR8069-1-201ENST00000616627 86 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 MIR8069-2-201ENST00000621412 86 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 RNU1-83P-201ENST00000363426 164 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 RN7SL354P-201ENST00000469282 294 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 RNU6-964P-201ENST00000516524 69 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 AP006289.1-201ENST00000538089 277 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 AC007066.2-202ENST00000566531 914 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 AC130352.1-201ENST00000602979 661 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.34□□□□□ -1.39
NPC1L1Q9UHC9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
NPC1L1Q9UHC9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NPC1L1Q9UHC9 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
NPC1L1Q9UHC9 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.34□□□□□ -1.4
NPC1L1Q9UHC9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 SNORD113.2-201ENST00000364166 89 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 SDHCP2-201ENST00000398565 501 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 MIR298-201ENST00000401212 88 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AL592291.1-201ENST00000403830 352 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 RPS16P5-201ENST00000406501 404 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AC119751.6-201ENST00000416712 186 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 Z74021.1-201ENST00000423610 407 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AC009963.2-201ENST00000453431 138 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AC138938.1-201ENST00000515431 782 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AC023762.1-201ENST00000603280 584 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AC105074.1-201ENST00000623380 3095 ntBASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NPC1L1Q9UHC9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 AL132640.2-201ENST00000559968 1698 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 MIR921-201ENST00000401133 56 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 RNU2-50P-201ENST00000410494 143 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 DNAJC19P7-201ENST00000428811 344 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 CEACAMP6-201ENST00000452007 574 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 RPL23AP72-201ENST00000492447 435 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms