Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AP001880.2-201ENST00000538233 448 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 MIR6780A-201ENST00000615089 68 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 BNIP3P41-202ENST00000616656 861 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
APOBEC3BQ9UH17 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
APOBEC3BQ9UH17 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
APOBEC3BQ9UH17 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
APOBEC3BQ9UH17 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.84□□□□□ -1.64
APOBEC3BQ9UH17 A2MP1-204ENST00000566278 4130 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 ZNF652P1-201ENST00000442420 1309 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC233968.1-201ENST00000611212 1300 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 LRRC37BP1-201ENST00000398851 714 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC136624.1-201ENST00000400791 413 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 RPL21P67-201ENST00000402896 478 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC009220.1-201ENST00000451614 275 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC011005.3-201ENST00000491624 395 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 RPL23AP72-201ENST00000492447 435 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AL049874.2-201ENST00000492636 288 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 MYL12BP2-201ENST00000503948 512 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC008676.3-201ENST00000521237 435 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 GSTP1P1-201ENST00000548078 319 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 NF1P10-201ENST00000613227 742 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AP000346.3-201ENST00000622821 210 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AP003499.2-201ENST00000624100 483 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 ADAM5-202ENST00000399789 1942 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AL031595.2-201ENST00000624215 19071 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 AC002525.1-201ENST00000624392 1622 ntBASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC3BQ9UH17 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC021242.1-201ENST00000507315 2035 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 RNA5SP505-201ENST00000364748 108 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 RNA5SP187-201ENST00000384400 119 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 MIR141-201ENST00000384975 95 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 MIR298-201ENST00000401212 88 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 PCNPP4-201ENST00000414817 517 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC013470.3-201ENST00000420252 1194 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AL450023.3-201ENST00000440592 271 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AL691482.1-201ENST00000453255 87 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 RPL23AP56-201ENST00000460778 453 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 CEACAMP10-202ENST00000495431 496 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AP000926.3-201ENST00000497201 299 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 OR51K1P-201ENST00000510214 950 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 RN7SKP276-201ENST00000516242 268 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 SOX5P1-201ENST00000524155 1127 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 ELOCP28-201ENST00000590044 317 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AF230666.2-201ENST00000602328 725 ntBASIC4.82□□□□□ -1.64
APOBEC3BQ9UH17 AL008729.2-201ENST00000606393 473 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms