Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AL163193.1-201ENST00000444895 788 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 RN7SL515P-201ENST00000463999 297 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 RPS26P39-201ENST00000469206 341 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 RN7SL319P-201ENST00000480656 221 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC090686.1-201ENST00000481577 749 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC090142.2-201ENST00000483263 416 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 RN7SL97P-201ENST00000486780 299 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC004980.4-201ENST00000513375 203 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC026688.1-201ENST00000520639 1168 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 OR8X1P-201ENST00000534542 869 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 MIR4691-201ENST00000583764 85 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 FAM60CP-201ENST00000591086 664 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC006116.3-201ENST00000592968 361 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC009163.6-201ENST00000612367 342 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 MIR6826-201ENST00000617808 98 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC243960.7-201ENST00000623532 707 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AL353662.3-201ENST00000625131 237 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 RN7SKP273-201ENST00000411392 314 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 TRIM60P17-201ENST00000415181 719 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 RPL36AP10-201ENST00000421785 322 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 RHOT1P3-201ENST00000436571 331 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AL031584.1-201ENST00000447169 754 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 BX284632.1-201ENST00000478218 541 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 LARP7P4-201ENST00000481075 878 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AC116562.1-201ENST00000485355 781 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AC020890.1-201ENST00000491837 504 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AK4P6-201ENST00000505168 528 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 RNA5SP92-201ENST00000516437 110 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 RNA5SP34-201ENST00000516887 130 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 HAUS8P1-201ENST00000549005 542 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AC019131.2-201ENST00000609071 870 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AC117490.2-201ENST00000610042 594 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AL121612.2-201ENST00000612261 482 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 MIR8069-1-201ENST00000616627 86 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 MIR8069-2-201ENST00000621412 86 ntBASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRRC40Q9H9A6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC008758.3-201ENST00000507003 1829 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 U8.4-201ENST00000363626 134 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 RNU1-106P-201ENST00000384382 164 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AL359643.1-201ENST00000404109 423 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 BMS1P13-201ENST00000417301 885 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 EIF4HP2-201ENST00000424380 563 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 CKS1BP6-201ENST00000424932 240 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AL450263.2-201ENST00000439400 589 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 CASP3P1-201ENST00000446037 609 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC000111.2-201ENST00000448200 210 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 RPL31P53-201ENST00000457065 348 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms