Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 MTND2P8-201ENST00000450555 1025 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 MTCYBP35-201ENST00000503630 1137 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC112184.1-201ENST00000505179 312 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 PRELID3BP5-201ENST00000508612 460 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 RN7SKP265-201ENST00000516448 223 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 OR4A17P-201ENST00000526032 904 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 OR5AZ1P-201ENST00000527448 943 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC113192.3-201ENST00000529152 742 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AP002373.2-201ENST00000541631 1060 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC068993.1-201ENST00000546724 589 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 OR11H3P-201ENST00000554547 982 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC084759.1-201ENST00000561168 290 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 MIR3934-201ENST00000579806 107 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 FAM25E-202ENST00000608562 189 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AL445493.3-201ENST00000619568 477 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC015660.5-201ENST00000623238 564 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AL078595.3-201ENST00000623815 1166 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC135068.5-201ENST00000624197 983 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC116158.1-201ENST00000560231 2129 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 AC092747.4-201ENST00000620519 1861 ntBASIC5.45□□□□□ -1.54
EBF3Q9H4W6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EBF3Q9H4W6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 PANDAR-201ENST00000629595 1506 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 SNURFL-201ENST00000309296 343 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 RN7SKP104-201ENST00000362605 328 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 SNORA51.8-201ENST00000384234 132 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 RPA2P2-201ENST00000419698 796 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC115285.1-201ENST00000424879 736 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 FABP7P2-201ENST00000429946 379 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 MRPL50P1-201ENST00000431951 384 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC083982.1-201ENST00000485679 344 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC108157.1-201ENST00000510511 539 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 RNU6-943P-201ENST00000516960 98 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 MORF4L1P3-201ENST00000525966 950 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 BRD9P1-201ENST00000529855 560 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 YWHAZP1-201ENST00000556286 722 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms