Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS11Q9H270 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 RPS7P2-201ENST00000435134 607 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 ARMC4P1-201ENST00000438905 707 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 RBMX2P4-201ENST00000441256 376 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 PA2G4P1-201ENST00000442248 1197 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS11Q9H270 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 UBE2V1P7-201ENST00000446395 340 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AL035551.1-201ENST00000446931 348 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 PTGES3P5-201ENST00000455109 434 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 RN7SL393P-201ENST00000463588 296 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 RN7SL197P-201ENST00000466981 299 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AC090602.1-201ENST00000469695 252 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AC022730.1-201ENST00000473114 568 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 H3F3AP5-201ENST00000475267 429 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 PFN1P6-201ENST00000476786 399 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 RPS4XP17-201ENST00000479057 754 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 OR7E157P-201ENST00000494376 911 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 OR7E99P-201ENST00000505750 922 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS11Q9H270 RNU6-1178P-201ENST00000516674 107 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AP000859.1-201ENST00000525536 307 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC124293.1-201ENST00000530034 493 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VPS11Q9H270 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC006518.2-201ENST00000542513 940 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS11Q9H270 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS11Q9H270 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 RN7SL66P-201ENST00000582099 264 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AF131215.7-201ENST00000602443 707 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AP001330.5-201ENST00000607176 411 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AC091965.4-201ENST00000607691 587 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AC024257.5-201ENST00000612739 531 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AC096861.1-201ENST00000616652 240 ntBASIC5.93□□□□□ -1.46
VPS11Q9H270 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS11Q9H270 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS11Q9H270 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS11Q9H270 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS11Q9H270 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS11Q9H270 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS11Q9H270 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
VPS11Q9H270 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS11Q9H270 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS11Q9H270 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
VPS11Q9H270 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
VPS11Q9H270 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC012020.1-201ENST00000624541 1728 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS11Q9H270 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS11Q9H270 RNU5B-4P-201ENST00000363508 111 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 RNA5SP279-201ENST00000365513 117 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 RNU6-1215P-201ENST00000384441 102 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS11Q9H270 Z68694.1-201ENST00000413929 841 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AL365203.2-201ENST00000423444 196 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC084290.1-201ENST00000434995 374 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC096775.1-201ENST00000437724 448 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AL590004.3-202ENST00000445883 451 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 RPS18P1-201ENST00000447840 458 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC104164.1-201ENST00000460282 590 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 MTAPP1-201ENST00000489154 819 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS11Q9H270 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS11Q9H270 AC034244.1-201ENST00000507687 207 ntBASIC5.92□□□□□ -1.46
VPS11Q9H270 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS11Q9H270 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms