Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 SALL4P2-201ENST00000423288 2910 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 Y_RNA.126-201ENST00000363382 111 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 RNA5SP28-201ENST00000363841 119 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 RNU1-149P-201ENST00000390870 161 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 GAPDHP15-201ENST00000398586 975 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 SNORA79B-201ENST00000410557 148 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 RN7SKP126-201ENST00000411143 300 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 USP9YP9-201ENST00000429406 715 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 RPL31P44-201ENST00000447680 377 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 AL672138.1-201ENST00000450604 1015 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC092754.1-201ENST00000472975 479 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC103987.1-201ENST00000473394 348 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC093827.1-201ENST00000480094 861 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 HMGB1P44-201ENST00000508597 572 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC004980.4-201ENST00000513375 203 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 TVP23CP2-201ENST00000571473 623 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AL161616.1-201ENST00000611867 286 ntBASIC5.04□□□□□ -1.6
TRIM4Q9C037 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM4Q9C037 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM4Q9C037 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC018529.3-201ENST00000624212 2254 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM4Q9C037 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM4Q9C037 OR9G4-201ENST00000302957 984 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 MIR133B-201ENST00000362210 119 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 RNVU1-6-201ENST00000364688 164 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 RNA5SP479-201ENST00000364858 117 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 RPS4XP9-201ENST00000405151 780 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC090018.1-201ENST00000434369 367 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 AL445433.1-201ENST00000457507 257 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC096741.1-201ENST00000472250 846 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 RN7SL814P-201ENST00000487715 300 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC021146.3-201ENST00000511911 260 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC022884.2-201ENST00000578535 580 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC104687.2-201ENST00000604442 342 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC097505.1-201ENST00000610199 565 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 AC009237.17-201ENST00000618111 748 ntBASIC5.03□□□□□ -1.6
TRIM4Q9C037 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM4Q9C037 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM4Q9C037 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM4Q9C037 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM4Q9C037 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms