Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AC019050.1-201ENST00000418508 492 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 RPL21P43-201ENST00000425440 472 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 RPS26P2-201ENST00000440331 348 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AL935212.3-201ENST00000450729 284 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AC010326.1-201ENST00000462726 602 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 RN7SKP46-201ENST00000515942 234 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AC125612.1-201ENST00000547580 377 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AC068790.7-201ENST00000602347 528 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AC005520.3-201ENST00000602874 370 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AL133338.2-201ENST00000604292 736 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 AL133268.1-201ENST00000405676 1401 ntBASIC3.85□□□□□ -1.79
GAFA1Q96PS6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GAFA1Q96PS6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 OR9K1P-202ENST00000641111 3217 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 AC125257.1-201ENST00000560400 2930 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 OR56B2P-201ENST00000317102 954 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 AL049697.2-201ENST00000403708 294 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 Z74021.1-201ENST00000423610 407 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 AC073264.2-201ENST00000448886 166 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 CEACAMP6-201ENST00000452007 574 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 SBDSP1-204ENST00000453858 737 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 ISCUP1-201ENST00000454451 448 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 SCARNA10-201ENST00000459255 330 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 RNF138P2-201ENST00000603490 592 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 AC116651.1-201ENST00000609724 556 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 MIR6780A-201ENST00000615089 68 ntBASIC3.84□□□□□ -1.79
GAFA1Q96PS6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GAFA1Q96PS6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.84□□□□□ -1.8
GAFA1Q96PS6 KARSP3-201ENST00000571212 1504 ntBASIC3.84□□□□□ -1.8
GAFA1Q96PS6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AC018765.1-201ENST00000623357 3446 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 OR14L1P-202ENST00000641545 3009 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AC021146.4-201ENST00000309229 279 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 RNA5SP397-201ENST00000391323 118 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 MIR937-201ENST00000401271 86 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 MIR1271-201ENST00000408537 86 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AL513533.1-201ENST00000453728 415 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AL445433.1-201ENST00000457507 257 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 RN7SL354P-201ENST00000469282 294 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 RPL23AP37-201ENST00000479658 549 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 RPS4XP18-201ENST00000495480 763 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AP006289.1-201ENST00000538089 277 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AC063949.1-201ENST00000552900 865 ntBASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.83□□□□□ -1.8
GAFA1Q96PS6 AC209154.1-201ENST00000582156 337 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms