Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
C9orf72Q96LT7 AL359922.3-201ENST00000624779 1670 ntBASIC4.96□□□□□ -1.61
C9orf72Q96LT7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
C9orf72Q96LT7 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 RN7SKP103-201ENST00000363848 320 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 RNA5SP455-201ENST00000365190 119 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 SNORA51.8-201ENST00000384234 132 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 MIR137-201ENST00000385223 102 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC004938.1-201ENST00000438468 308 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 MRPL48P1-201ENST00000445390 636 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 VN1R96P-201ENST00000446052 858 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AL589765.3-201ENST00000446084 462 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC000111.2-201ENST00000448200 210 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 snoU13.20-201ENST00000459180 104 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 RPL37AP8-201ENST00000494116 276 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 PCNPP1-201ENST00000552501 511 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 MIR3934-201ENST00000579806 107 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC019206.1-201ENST00000621938 425 ntBASIC4.96□□□□□ -1.62
C9orf72Q96LT7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf72Q96LT7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 SNORD96B-201ENST00000386148 79 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC006466.1-201ENST00000438721 289 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 SUMO2P1-206ENST00000445436 284 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 TRY2P-201ENST00000448860 689 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AP000942.1-201ENST00000463969 747 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC005000.1-201ENST00000536192 288 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 MIR4691-201ENST00000583764 85 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC011487.3-201ENST00000593607 453 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC087468.1-201ENST00000604365 630 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC005084.1-201ENST00000605160 304 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 SNORD91B-202ENST00000608459 222 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AL022401.1-201ENST00000619498 108 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC006840.1-201ENST00000623069 542 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
C9orf72Q96LT7 DHX9P1-201ENST00000436565 3076 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 AC008758.3-201ENST00000507003 1829 ntBASIC4.95□□□□□ -1.62
C9orf72Q96LT7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.94□□□□□ -1.62
C9orf72Q96LT7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
C9orf72Q96LT7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.94□□□□□ -1.62
C9orf72Q96LT7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.94□□□□□ -1.62
C9orf72Q96LT7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.94□□□□□ -1.62
C9orf72Q96LT7 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
C9orf72Q96LT7 AL136116.2-201ENST00000404020 785 ntBASIC4.94□□□□□ -1.62
C9orf72Q96LT7 TBCAP2-201ENST00000416175 326 ntBASIC4.94□□□□□ -1.62
C9orf72Q96LT7 AC244033.1-201ENST00000426826 870 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms