Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SUMO2P3-201ENST00000438311 288 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 GAPDHP58-201ENST00000438477 1006 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 HMGN1P2-201ENST00000445197 310 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 RPL36AP39-201ENST00000445859 318 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 HMGB1P26-201ENST00000452520 628 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC108729.2-201ENST00000476543 840 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 RPL7P41-201ENST00000485823 957 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC004923.2-201ENST00000529649 369 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC024405.1-201ENST00000532521 1042 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC008083.2-201ENST00000546707 476 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 MIR4271-201ENST00000582451 67 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 TAS2R6P-201ENST00000605022 826 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC073137.1-201ENST00000605636 634 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AL136370.1-201ENST00000608166 691 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 CASC19-204ENST00000641001 2055 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 RNA5SP223-201ENST00000365174 120 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 RNU4-2-201ENST00000365668 141 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 RNU6-178P-201ENST00000384631 104 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 DBIP1-201ENST00000401435 260 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AL160175.1-201ENST00000428124 247 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 MTCO3P21-201ENST00000430791 643 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 RPL17P35-201ENST00000432217 549 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 SSXP3-201ENST00000442971 1300 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC243772.1-201ENST00000451620 410 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC112206.1-201ENST00000468416 477 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 SYT14P1-201ENST00000481459 721 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 RN7SL741P-201ENST00000482473 289 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC025768.1-201ENST00000510057 267 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 NPM1P6-201ENST00000521088 871 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC092079.1-201ENST00000558620 1985 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AP005119.2-201ENST00000579735 1105 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC023421.1-201ENST00000590535 1785 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC100767.2-201ENST00000604840 693 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC018695.5-201ENST00000605872 315 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC108865.2-201ENST00000606881 432 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AL023881.1-201ENST00000621088 301 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC132068.1-201ENST00000623805 459 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC097372.4-201ENST00000625025 466 ntBASIC4.59□□□□□ -1.67
RFT1Q96AA3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.59□□□□□ -1.67
RFT1Q96AA3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.59□□□□□ -1.68
RFT1Q96AA3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RFT1Q96AA3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFT1Q96AA3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
RFT1Q96AA3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms