Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL133244.1-201ENST00000456007 258 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 TPT1P1-201ENST00000458495 518 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC004815.1-201ENST00000484185 331 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 RPS27AP16-201ENST00000492222 470 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC090638.1-201ENST00000498296 909 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 NDUFA5P12-201ENST00000503796 343 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC093311.1-201ENST00000506586 2021 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC074255.1-201ENST00000511259 501 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 RNU6-276P-201ENST00000516114 96 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AP006245.2-201ENST00000522004 300 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC011611.5-201ENST00000552477 578 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AL512329.2-201ENST00000607350 548 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC008147.4-201ENST00000617570 1204 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC118658.2-201ENST00000618697 459 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC073569.3-201ENST00000619055 682 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 MIR6837-201ENST00000620884 64 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC132068.1-201ENST00000623805 459 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 AL353796.1-201ENST00000561542 3241 ntBASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC33Q8N5R6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 GTF2H2B-203ENST00000508065 1432 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC073429.2-201ENST00000569694 1444 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 RNU1-77P-201ENST00000390868 162 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 GAPDHP42-201ENST00000406848 981 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC013404.1-201ENST00000413068 249 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 TMEM183AP1-205ENST00000432739 290 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AP000936.3-201ENST00000438127 255 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AL035551.1-201ENST00000446931 348 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AL450023.1-201ENST00000450868 751 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 RPL7P45-201ENST00000455851 743 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 RPL7P39-201ENST00000481157 744 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 RN7SL727P-201ENST00000482164 296 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC024558.1-201ENST00000505008 528 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC147055.3-201ENST00000510547 851 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 RN7SKP253-201ENST00000516424 309 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC019322.1-201ENST00000571869 389 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 VN1R87P-201ENST00000596706 487 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AL121890.3-201ENST00000618494 516 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC068787.1-201ENST00000623908 691 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 SAMMSON-227ENST00000642114 1199 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms