Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 Z93019.1-201ENST00000416450 973 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC007568.1-201ENST00000422912 471 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 RPS26P39-201ENST00000469206 341 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 RPL7P18-201ENST00000478965 734 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 SETP14-201ENST00000497538 873 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 WBP1LP4-201ENST00000505043 344 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC008562.1-201ENST00000521763 330 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 MTCO1P49-201ENST00000523429 802 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC006530.1-201ENST00000555980 571 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC015726.1-201ENST00000602353 681 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC106791.2-201ENST00000604680 391 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AL163642.2-201ENST00000604722 1019 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC245008.1-201ENST00000608123 476 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC091931.1-201ENST00000623488 728 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AL691477.1-201ENST00000624398 162 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC007671.2-201ENST00000637344 619 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC120338.1-201ENST00000625074 1541 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 GUCY1B2-204ENST00000531898 1979 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC053481.2-202ENST00000582394 1500 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 IL6STP1-201ENST00000346911 1020 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RN7SKP160-201ENST00000363804 340 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RN7SKP128-201ENST00000364270 303 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RNU105B-201ENST00000364478 208 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AL590084.2-201ENST00000401481 382 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RN7SKP166-201ENST00000410812 305 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 PTCD2P2-201ENST00000415579 1095 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 BX323845.3-201ENST00000428215 527 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC005345.1-201ENST00000431868 217 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC004865.1-201ENST00000442276 1003 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RPL7P59-201ENST00000447700 943 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC243772.1-201ENST00000451620 410 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RPL37P3-201ENST00000456825 293 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 PNPLA4P1-201ENST00000458328 305 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RPS27P23-201ENST00000487608 251 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC083795.1-201ENST00000491760 320 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RN7SL284P-201ENST00000498823 275 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC010587.2-201ENST00000511727 448 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 snoU109.6-201ENST00000516831 118 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AP005639.1-201ENST00000526939 192 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC005832.3-201ENST00000537929 631 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC073916.1-201ENST00000545095 130 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC016180.1-201ENST00000567945 403 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC233702.7-202ENST00000582941 211 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 VN1R82P-201ENST00000601481 356 ntBASIC6.17□□□□□ -1.42
SYNPOQ8N3V7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms