Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 PTGES3P1-201ENST00000439531 483 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 MTND5P2-201ENST00000442927 1142 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 RPL36AP39-201ENST00000445859 318 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 PTENP1-201ENST00000447117 1215 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 OR2A3P-201ENST00000493774 953 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 RNU6-615P-201ENST00000516065 106 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 SNORA43.3-201ENST00000517240 103 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC020937.1-201ENST00000519677 1013 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC060788.1-201ENST00000521318 469 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC023813.2-201ENST00000564321 469 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 RBM22P1-201ENST00000578589 1214 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 MIR3614-201ENST00000581261 86 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 NANOGP3-201ENST00000605855 286 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 AL357078.3-201ENST00000607528 618 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AP000254.1-201ENST00000609934 520 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 AP000255.1-201ENST00000610276 676 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC007490.1-201ENST00000624321 703 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC005609.4-201ENST00000625071 447 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AL158152.1-201ENST00000602652 1435 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC004076.2-201ENST00000620532 3323 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC011503.2-201ENST00000594230 1500 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC239868.2-201ENST00000564237 4527 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC092451.3-201ENST00000625067 1343 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC140479.2-201ENST00000421567 3130 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 NLRP3P1-201ENST00000622303 1785 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 MIR365B-201ENST00000362317 111 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 RNU6-697P-201ENST00000363348 107 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 SNORD56.4-201ENST00000363883 71 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 RNU4-4P-201ENST00000364588 130 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 RNA5SP131-201ENST00000365452 119 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 RNU6-517P-201ENST00000384362 110 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 RNU11-201ENST00000387069 134 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC087752.1-201ENST00000391360 558 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 ELOCP17-201ENST00000414751 326 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC008173.1-201ENST00000418901 264 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 RNGTTP1-201ENST00000420965 728 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 IFNNP1-201ENST00000429219 553 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 GAPDHP34-201ENST00000432112 823 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 NEK4P1-201ENST00000433383 879 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC093899.1-201ENST00000457984 376 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 RNU7-125P-201ENST00000458760 62 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC067904.2-201ENST00000517322 1283 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 CYCSP22-201ENST00000517555 339 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 NDUFS5P6-201ENST00000529136 295 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC095057.3-201ENST00000567102 1157 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC008521.2-201ENST00000591021 259 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AL360012.1-201ENST00000602813 131 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AL020997.3-201ENST00000602843 359 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC016877.3-201ENST00000606778 504 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC093388.1-201ENST00000609166 430 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms