Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 RN7SL329P-201ENST00000467740 299 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 HMGN2P25-201ENST00000486956 268 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 NDUFA5P12-201ENST00000503796 343 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC113398.2-201ENST00000507630 558 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC105185.1-201ENST00000518705 535 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 OSBPL9P5-201ENST00000542581 171 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC068790.6-201ENST00000602558 258 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AP000403.1-201ENST00000603349 851 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC105254.2-201ENST00000603636 436 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC133644.2-201ENST00000608142 540 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC009163.6-201ENST00000612367 342 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 CR589904.2-201ENST00000612533 440 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AL121890.3-201ENST00000618494 516 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AP002799.1-201ENST00000623552 423 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 BCORP1-203ENST00000513194 5093 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 HSPA8P18-201ENST00000439846 1928 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.34□□□□□ -1.56
BHLHA9Q7RTU4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.34□□□□□ -1.56
BHLHA9Q7RTU4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.34□□□□□ -1.56
BHLHA9Q7RTU4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 SNORA2.3-201ENST00000383920 135 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 TAS2R15P-201ENST00000390674 928 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AL078599.1-201ENST00000402075 293 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AL390316.1-201ENST00000406279 553 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 SNORA77-201ENST00000408716 125 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 RPL5P2-201ENST00000429598 854 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC112492.1-201ENST00000449607 712 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 OR52E3P-201ENST00000452083 936 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AL359385.1-201ENST00000456509 365 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 RNA5SP43-201ENST00000516559 110 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 RN7SKP147-201ENST00000517154 244 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 C1DP5-201ENST00000525775 383 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC007834.2-201ENST00000536310 343 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 NPM1P5-201ENST00000557228 838 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 MTND2P13-201ENST00000577438 1039 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 PRPF19P1-201ENST00000584766 898 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AP003973.1-201ENST00000604639 691 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC006338.2-201ENST00000616864 791 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC121761.2-201ENST00000617300 689 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC005899.7-201ENST00000618199 588 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC104985.3-201ENST00000623479 597 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC068787.1-201ENST00000623908 691 ntBASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.33□□□□□ -1.56
BHLHA9Q7RTU4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms