Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 PRPF38AP1-201ENST00000451976 933 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 TPT1P1-201ENST00000458495 518 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC021660.1-201ENST00000465006 554 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 MTND6P6-201ENST00000478031 263 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AL049874.2-201ENST00000492636 288 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 RPL37AP8-201ENST00000494116 276 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC108693.1-201ENST00000496068 432 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 MTND3P24-201ENST00000506306 329 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 MTND2P31-201ENST00000512602 616 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 HMGB1P40-201ENST00000525121 540 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 OSBPL9P3-201ENST00000534523 595 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC134349.2-201ENST00000535136 910 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 PRPF19P1-201ENST00000584766 898 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC005252.1-201ENST00000604518 1063 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AL450270.1-201ENST00000606160 391 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 MIR7973-1-201ENST00000614683 76 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 BNIP3P41-202ENST00000616656 861 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC004817.4-201ENST00000602396 3625 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NHLRC1Q6VVB1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 U3.2-201ENST00000362981 210 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 U3.3-201ENST00000362986 216 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 RN7SKP162-201ENST00000363605 345 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 MIR142-201ENST00000384835 87 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 MIR589-201ENST00000385238 99 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 OR3A2-201ENST00000408891 1076 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AL121882.1-201ENST00000422893 417 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC009965.2-201ENST00000425328 970 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 MTND2P6-201ENST00000455337 1030 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC108161.1-201ENST00000461060 402 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AL133445.1-201ENST00000467051 452 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC010468.3-201ENST00000508225 458 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC106872.4-201ENST00000510050 523 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC006427.1-201ENST00000514359 712 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 SNORA76.2-201ENST00000517095 137 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 IGKV2-18-201ENST00000522607 343 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC009597.2-201ENST00000604659 592 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC018618.2-201ENST00000604770 446 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC005840.5-201ENST00000619166 599 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC015908.5-201ENST00000623289 343 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AL356094.1-201ENST00000624663 1212 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 AC104260.2-201ENST00000623551 3497 ntBASIC4.7□□□□□ -1.66
NHLRC1Q6VVB1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms