Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC234775.3-201ENST00000564612 656 ntBASIC5.86□□□□□ -1.47
CTR9Q6PD62 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.86□□□□□ -1.47
CTR9Q6PD62 AL049794.2-201ENST00000616301 365 ntBASIC5.86□□□□□ -1.47
CTR9Q6PD62 AC020763.5-201ENST00000623298 430 ntBASIC5.86□□□□□ -1.47
CTR9Q6PD62 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTR9Q6PD62 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.86□□□□□ -1.47
CTR9Q6PD62 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CTR9Q6PD62 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.86□□□□□ -1.47
CTR9Q6PD62 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 MUC2-202ENST00000613187 4845 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTR9Q6PD62 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 GAPDHP15-201ENST00000398586 975 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 RPL10P10-201ENST00000403509 664 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 TBCAP2-201ENST00000416175 326 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 QRSL1P2-201ENST00000418582 964 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 AC000111.2-201ENST00000448200 210 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTR9Q6PD62 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTR9Q6PD62 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 AC138938.1-201ENST00000515431 782 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 AC026688.1-201ENST00000520639 1168 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 MTATP6P25-201ENST00000574491 261 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTR9Q6PD62 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTR9Q6PD62 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTR9Q6PD62 OR51H2P-202ENST00000641424 3046 ntBASIC5.85□□□□□ -1.47
CTR9Q6PD62 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
CTR9Q6PD62 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTR9Q6PD62 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTR9Q6PD62 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AC063976.2-201ENST00000425667 3556 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 RPL21P67-201ENST00000402896 478 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 PCNPP4-201ENST00000414817 517 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 USP9YP9-201ENST00000429406 715 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 NPM1P48-201ENST00000436002 853 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AL356390.1-201ENST00000455684 397 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 OR9N1P-201ENST00000491296 333 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CTR9Q6PD62 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AC124856.1-201ENST00000600819 896 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 AC104687.2-201ENST00000604442 342 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 AL121890.2-201ENST00000617644 465 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 AL022401.1-201ENST00000619498 108 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 AP001005.3-201ENST00000622049 129 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CTR9Q6PD62 AL022393.1-201ENST00000625142 1677 ntBASIC5.84□□□□□ -1.47
CTR9Q6PD62 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CTR9Q6PD62 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CTR9Q6PD62 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
CTR9Q6PD62 AL138820.1-201ENST00000617901 5305 ntBASIC5.84□□□□□ -1.48
CTR9Q6PD62 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.83□□□□□ -1.48
CTR9Q6PD62 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CTR9Q6PD62 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
CTR9Q6PD62 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.83□□□□□ -1.48
CTR9Q6PD62 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CTR9Q6PD62 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.83□□□□□ -1.48
CTR9Q6PD62 AP001273.1-201ENST00000624493 3152 ntBASIC5.83□□□□□ -1.48
CTR9Q6PD62 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTR9Q6PD62 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.83□□□□□ -1.48
CTR9Q6PD62 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms