Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 SKP1P3-201ENST00000429280 487 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 SCAND3P1-201ENST00000439854 1060 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 OR7E125P-201ENST00000443450 846 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 YWHAEP1-201ENST00000453697 763 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 RPL10P17-201ENST00000453852 316 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC010350.1-201ENST00000504908 231 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 RN7SKP260-201ENST00000516907 149 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC021733.2-201ENST00000518830 497 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 NMNAT1P1-201ENST00000554095 876 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC022404.1-201ENST00000555320 273 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC008536.1-201ENST00000602872 669 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 RNA5SP440-201ENST00000612665 119 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 MIR6071-201ENST00000616741 78 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC140113.4-201ENST00000622087 222 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 RNF19BPY-201ENST00000458209 1550 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 HSPA8P17-201ENST00000427029 1382 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 OR11H5P-202ENST00000641612 1325 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 SNORA17.1-201ENST00000362945 126 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 RNA5SP39-201ENST00000411245 120 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 RN7SKP293-201ENST00000411389 296 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 DDX39BP1-205ENST00000422507 192 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 RPS6P12-201ENST00000432491 726 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 RPS26P41-201ENST00000450370 284 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 NDUFS5P3-201ENST00000450668 321 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 IGHV5-78-201ENST00000450948 295 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC094085.1-201ENST00000468914 584 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 EIF4E2P2-201ENST00000492033 736 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 IGLVIV-53-201ENST00000520107 367 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC024405.1-201ENST00000532521 1042 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC027544.3-201ENST00000535082 757 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 TVP23CP2-201ENST00000571473 623 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC020634.1-201ENST00000608701 549 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 AC234782.5-201ENST00000617723 324 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 MIR6715B-201ENST00000637172 77 ntBASIC4.32□□□□□ -1.72
CCDC58Q4VC31 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC58Q4VC31 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 RNA5SP183-201ENST00000362452 119 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC007068.1-201ENST00000396690 844 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AL021331.1-201ENST00000402817 582 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 VN1R12P-201ENST00000403778 876 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 RNA5SP104-201ENST00000410989 118 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 HMGN1P2-201ENST00000445197 310 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC104651.2-201ENST00000447549 528 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 TCEA1P1-201ENST00000449716 880 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 YRDCP3-201ENST00000456507 480 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms